Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.03■■□□□ 1.12
Hmbox1Q8BJA3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hmbox1Q8BJA3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hmbox1Q8BJA3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Hmbox1Q8BJA3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Hmbox1Q8BJA3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hmbox1Q8BJA3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hmbox1Q8BJA3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Hmbox1Q8BJA3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Hmbox1Q8BJA3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Hmbox1Q8BJA3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.01■■□□□ 1.11
Hmbox1Q8BJA3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmbox1Q8BJA3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Hmbox1Q8BJA3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmbox1Q8BJA3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmbox1Q8BJA3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Hmbox1Q8BJA3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Hmbox1Q8BJA3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22■■□□□ 1.11
Hmbox1Q8BJA3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hmbox1Q8BJA3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22■■□□□ 1.11
Hmbox1Q8BJA3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Hmbox1Q8BJA3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hmbox1Q8BJA3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hmbox1Q8BJA3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hmbox1Q8BJA3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Hmbox1Q8BJA3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hmbox1Q8BJA3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.99■■□□□ 1.11
Hmbox1Q8BJA3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmbox1Q8BJA3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmbox1Q8BJA3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmbox1Q8BJA3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmbox1Q8BJA3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmbox1Q8BJA3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hmbox1Q8BJA3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmbox1Q8BJA3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Hmbox1Q8BJA3 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.96■■□□□ 1.11
Hmbox1Q8BJA3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Hmbox1Q8BJA3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.96■■□□□ 1.11
Hmbox1Q8BJA3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmbox1Q8BJA3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Hmbox1Q8BJA3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmbox1Q8BJA3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmbox1Q8BJA3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmbox1Q8BJA3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmbox1Q8BJA3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hmbox1Q8BJA3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Hmbox1Q8BJA3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Hmbox1Q8BJA3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmbox1Q8BJA3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmbox1Q8BJA3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Hmbox1Q8BJA3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmbox1Q8BJA3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmbox1Q8BJA3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmbox1Q8BJA3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmbox1Q8BJA3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hmbox1Q8BJA3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Hmbox1Q8BJA3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmbox1Q8BJA3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmbox1Q8BJA3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Hmbox1Q8BJA3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Hmbox1Q8BJA3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmbox1Q8BJA3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmbox1Q8BJA3 Gm15546-201ENSMUST00000122095 826 ntBASIC21.92■■□□□ 1.1
Hmbox1Q8BJA3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hmbox1Q8BJA3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.91■■□□□ 1.1
Hmbox1Q8BJA3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Hmbox1Q8BJA3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hmbox1Q8BJA3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hmbox1Q8BJA3 Gm14523-201ENSMUST00000117260 558 ntBASIC21.91■■□□□ 1.1
Hmbox1Q8BJA3 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.91■■□□□ 1.1
Hmbox1Q8BJA3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.91■■□□□ 1.1
Hmbox1Q8BJA3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Hmbox1Q8BJA3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmbox1Q8BJA3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmbox1Q8BJA3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hmbox1Q8BJA3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hmbox1Q8BJA3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Hmbox1Q8BJA3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hmbox1Q8BJA3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hmbox1Q8BJA3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.89■■□□□ 1.09
Hmbox1Q8BJA3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Hmbox1Q8BJA3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmbox1Q8BJA3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmbox1Q8BJA3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hmbox1Q8BJA3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.88■■□□□ 1.09
Hmbox1Q8BJA3 Mir3960-201ENSMUST00000198213 73 ntBASIC21.88■■□□□ 1.09
Hmbox1Q8BJA3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmbox1Q8BJA3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmbox1Q8BJA3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hmbox1Q8BJA3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmbox1Q8BJA3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hmbox1Q8BJA3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hmbox1Q8BJA3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmbox1Q8BJA3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hmbox1Q8BJA3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmbox1Q8BJA3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmbox1Q8BJA3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmbox1Q8BJA3 Gm30023-201ENSMUST00000197970 889 ntBASIC21.85■■□□□ 1.09
Hmbox1Q8BJA3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmbox1Q8BJA3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms