Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf38Q8BI21 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf38Q8BI21 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf38Q8BI21 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf38Q8BI21 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf38Q8BI21 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Rnf38Q8BI21 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf38Q8BI21 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
Rnf38Q8BI21 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf38Q8BI21 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Rnf38Q8BI21 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Rnf38Q8BI21 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf38Q8BI21 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf38Q8BI21 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf38Q8BI21 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.94■■□□□ 1.1
Rnf38Q8BI21 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf38Q8BI21 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf38Q8BI21 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf38Q8BI21 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Rnf38Q8BI21 Nkain2-201ENSMUST00000092602 558 ntBASIC21.93■■□□□ 1.1
Rnf38Q8BI21 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf38Q8BI21 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf38Q8BI21 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.92■■□□□ 1.1
Rnf38Q8BI21 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.92■■□□□ 1.1
Rnf38Q8BI21 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf38Q8BI21 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Rnf38Q8BI21 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf38Q8BI21 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Rnf38Q8BI21 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf38Q8BI21 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf38Q8BI21 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.9■■□□□ 1.1
Rnf38Q8BI21 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf38Q8BI21 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
Rnf38Q8BI21 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.89■■□□□ 1.09
Rnf38Q8BI21 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf38Q8BI21 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf38Q8BI21 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf38Q8BI21 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf38Q8BI21 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.88■■□□□ 1.09
Rnf38Q8BI21 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf38Q8BI21 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.88■■□□□ 1.09
Rnf38Q8BI21 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf38Q8BI21 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Rnf38Q8BI21 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf38Q8BI21 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf38Q8BI21 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Rnf38Q8BI21 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf38Q8BI21 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.87■■□□□ 1.09
Rnf38Q8BI21 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf38Q8BI21 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf38Q8BI21 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf38Q8BI21 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf38Q8BI21 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.85■■□□□ 1.09
Rnf38Q8BI21 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.85■■□□□ 1.09
Rnf38Q8BI21 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf38Q8BI21 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.84■■□□□ 1.09
Rnf38Q8BI21 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Rnf38Q8BI21 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf38Q8BI21 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Rnf38Q8BI21 Gm37136-201ENSMUST00000194368 194 ntBASIC21.83■■□□□ 1.09
Rnf38Q8BI21 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf38Q8BI21 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rnf38Q8BI21 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf38Q8BI21 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rnf38Q8BI21 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf38Q8BI21 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf38Q8BI21 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf38Q8BI21 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf38Q8BI21 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf38Q8BI21 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.81■■□□□ 1.08
Rnf38Q8BI21 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Rnf38Q8BI21 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf38Q8BI21 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf38Q8BI21 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf38Q8BI21 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf38Q8BI21 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.8■■□□□ 1.08
Rnf38Q8BI21 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf38Q8BI21 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf38Q8BI21 Gm6821-201ENSMUST00000107540 542 ntBASIC21.79■■□□□ 1.08
Rnf38Q8BI21 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf38Q8BI21 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf38Q8BI21 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf38Q8BI21 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf38Q8BI21 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Rnf38Q8BI21 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.78■■□□□ 1.08
Rnf38Q8BI21 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf38Q8BI21 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf38Q8BI21 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Rnf38Q8BI21 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.77■■□□□ 1.08
Rnf38Q8BI21 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Rnf38Q8BI21 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf38Q8BI21 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf38Q8BI21 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
Rnf38Q8BI21 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf38Q8BI21 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf38Q8BI21 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf38Q8BI21 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf38Q8BI21 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf38Q8BI21 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf38Q8BI21 Gm8503-201ENSMUST00000118131 455 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms