Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smndc1Q8BGT7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Smndc1Q8BGT7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smndc1Q8BGT7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smndc1Q8BGT7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smndc1Q8BGT7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Smndc1Q8BGT7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.8■■□□□ 1.08
Smndc1Q8BGT7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smndc1Q8BGT7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smndc1Q8BGT7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smndc1Q8BGT7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smndc1Q8BGT7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smndc1Q8BGT7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smndc1Q8BGT7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smndc1Q8BGT7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Smndc1Q8BGT7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smndc1Q8BGT7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smndc1Q8BGT7 Gm6821-201ENSMUST00000107540 542 ntBASIC21.77■■□□□ 1.08
Smndc1Q8BGT7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Smndc1Q8BGT7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Smndc1Q8BGT7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Smndc1Q8BGT7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smndc1Q8BGT7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smndc1Q8BGT7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smndc1Q8BGT7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smndc1Q8BGT7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smndc1Q8BGT7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Smndc1Q8BGT7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smndc1Q8BGT7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Smndc1Q8BGT7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smndc1Q8BGT7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smndc1Q8BGT7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smndc1Q8BGT7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smndc1Q8BGT7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smndc1Q8BGT7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Smndc1Q8BGT7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smndc1Q8BGT7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smndc1Q8BGT7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smndc1Q8BGT7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smndc1Q8BGT7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smndc1Q8BGT7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.74■■□□□ 1.07
Smndc1Q8BGT7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.74■■□□□ 1.07
Smndc1Q8BGT7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smndc1Q8BGT7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Smndc1Q8BGT7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smndc1Q8BGT7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
Smndc1Q8BGT7 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.73■■□□□ 1.07
Smndc1Q8BGT7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smndc1Q8BGT7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smndc1Q8BGT7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Smndc1Q8BGT7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smndc1Q8BGT7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Smndc1Q8BGT7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Smndc1Q8BGT7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smndc1Q8BGT7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smndc1Q8BGT7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smndc1Q8BGT7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smndc1Q8BGT7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Smndc1Q8BGT7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Smndc1Q8BGT7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smndc1Q8BGT7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smndc1Q8BGT7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smndc1Q8BGT7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smndc1Q8BGT7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smndc1Q8BGT7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Smndc1Q8BGT7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smndc1Q8BGT7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smndc1Q8BGT7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smndc1Q8BGT7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smndc1Q8BGT7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smndc1Q8BGT7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smndc1Q8BGT7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.67■■□□□ 1.06
Smndc1Q8BGT7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smndc1Q8BGT7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smndc1Q8BGT7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smndc1Q8BGT7 Gm8503-201ENSMUST00000118131 455 ntBASIC21.66■■□□□ 1.06
Smndc1Q8BGT7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smndc1Q8BGT7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smndc1Q8BGT7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smndc1Q8BGT7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.65■■□□□ 1.06
Smndc1Q8BGT7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smndc1Q8BGT7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smndc1Q8BGT7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smndc1Q8BGT7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smndc1Q8BGT7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smndc1Q8BGT7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smndc1Q8BGT7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smndc1Q8BGT7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smndc1Q8BGT7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smndc1Q8BGT7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smndc1Q8BGT7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smndc1Q8BGT7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smndc1Q8BGT7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smndc1Q8BGT7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.63■■□□□ 1.05
Smndc1Q8BGT7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Smndc1Q8BGT7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smndc1Q8BGT7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smndc1Q8BGT7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smndc1Q8BGT7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smndc1Q8BGT7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms