Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trnp1Q80ZI1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trnp1Q80ZI1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trnp1Q80ZI1 Gm15820-201ENSMUST00000201566 728 ntBASIC26.5■■□□□ 1.83
Trnp1Q80ZI1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
Trnp1Q80ZI1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trnp1Q80ZI1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Trnp1Q80ZI1 Zxda-201ENSMUST00000117281 2621 ntBASIC26.49■■□□□ 1.83
Trnp1Q80ZI1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Trnp1Q80ZI1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trnp1Q80ZI1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.48■■□□□ 1.83
Trnp1Q80ZI1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Trnp1Q80ZI1 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.48■■□□□ 1.83
Trnp1Q80ZI1 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.48■■□□□ 1.83
Trnp1Q80ZI1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trnp1Q80ZI1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.47■■□□□ 1.83
Trnp1Q80ZI1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trnp1Q80ZI1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.46■■□□□ 1.83
Trnp1Q80ZI1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trnp1Q80ZI1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.46■■□□□ 1.83
Trnp1Q80ZI1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Trnp1Q80ZI1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trnp1Q80ZI1 Gm45102-201ENSMUST00000207427 857 ntBASIC26.45■■□□□ 1.82
Trnp1Q80ZI1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
Trnp1Q80ZI1 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.44■■□□□ 1.82
Trnp1Q80ZI1 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.44■■□□□ 1.82
Trnp1Q80ZI1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trnp1Q80ZI1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trnp1Q80ZI1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trnp1Q80ZI1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.43■■□□□ 1.82
Trnp1Q80ZI1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trnp1Q80ZI1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.43■■□□□ 1.82
Trnp1Q80ZI1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.43■■□□□ 1.82
Trnp1Q80ZI1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trnp1Q80ZI1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trnp1Q80ZI1 Gm45444-201ENSMUST00000211394 898 ntBASIC26.42■■□□□ 1.82
Trnp1Q80ZI1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trnp1Q80ZI1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.41■■□□□ 1.82
Trnp1Q80ZI1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
Trnp1Q80ZI1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Trnp1Q80ZI1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trnp1Q80ZI1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.39■■□□□ 1.82
Trnp1Q80ZI1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trnp1Q80ZI1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trnp1Q80ZI1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Trnp1Q80ZI1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Trnp1Q80ZI1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Trnp1Q80ZI1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trnp1Q80ZI1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trnp1Q80ZI1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Trnp1Q80ZI1 Gm14117-201ENSMUST00000122417 843 ntBASIC26.35■■□□□ 1.81
Trnp1Q80ZI1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Trnp1Q80ZI1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trnp1Q80ZI1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.33■■□□□ 1.81
Trnp1Q80ZI1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trnp1Q80ZI1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Trnp1Q80ZI1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trnp1Q80ZI1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trnp1Q80ZI1 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.31■■□□□ 1.8
Trnp1Q80ZI1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trnp1Q80ZI1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trnp1Q80ZI1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.3■■□□□ 1.8
Trnp1Q80ZI1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.3■■□□□ 1.8
Trnp1Q80ZI1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trnp1Q80ZI1 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.29■■□□□ 1.8
Trnp1Q80ZI1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.29■■□□□ 1.8
Trnp1Q80ZI1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.29■■□□□ 1.8
Trnp1Q80ZI1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Trnp1Q80ZI1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trnp1Q80ZI1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Trnp1Q80ZI1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trnp1Q80ZI1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trnp1Q80ZI1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
Trnp1Q80ZI1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trnp1Q80ZI1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.26■■□□□ 1.79
Trnp1Q80ZI1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Trnp1Q80ZI1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trnp1Q80ZI1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trnp1Q80ZI1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.24■■□□□ 1.79
Trnp1Q80ZI1 Gm9959-201ENSMUST00000068277 390 ntBASIC26.24■■□□□ 1.79
Trnp1Q80ZI1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trnp1Q80ZI1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Trnp1Q80ZI1 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.23■■□□□ 1.79
Trnp1Q80ZI1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trnp1Q80ZI1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.22■■□□□ 1.79
Trnp1Q80ZI1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.22■■□□□ 1.79
Trnp1Q80ZI1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Trnp1Q80ZI1 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.21■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms