Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rnf168Q80XJ2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rnf168Q80XJ2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rnf168Q80XJ2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Rnf168Q80XJ2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf168Q80XJ2 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.22■■□□□ 1.47
Rnf168Q80XJ2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf168Q80XJ2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Rnf168Q80XJ2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.21■■□□□ 1.47
Rnf168Q80XJ2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.2■■□□□ 1.46
Rnf168Q80XJ2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.2■■□□□ 1.46
Rnf168Q80XJ2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rnf168Q80XJ2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Rnf168Q80XJ2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf168Q80XJ2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.19■■□□□ 1.46
Rnf168Q80XJ2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.18■■□□□ 1.46
Rnf168Q80XJ2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.18■■□□□ 1.46
Rnf168Q80XJ2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnf168Q80XJ2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.18■■□□□ 1.46
Rnf168Q80XJ2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rnf168Q80XJ2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf168Q80XJ2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf168Q80XJ2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf168Q80XJ2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf168Q80XJ2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Rnf168Q80XJ2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.15■■□□□ 1.46
Rnf168Q80XJ2 Terc-201ENSMUST00000082862 423 ntBASIC24.15■■□□□ 1.46
Rnf168Q80XJ2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf168Q80XJ2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf168Q80XJ2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rnf168Q80XJ2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.14■■□□□ 1.45
Rnf168Q80XJ2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Rnf168Q80XJ2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf168Q80XJ2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf168Q80XJ2 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.13■■□□□ 1.45
Rnf168Q80XJ2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf168Q80XJ2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf168Q80XJ2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf168Q80XJ2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf168Q80XJ2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf168Q80XJ2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf168Q80XJ2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf168Q80XJ2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf168Q80XJ2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf168Q80XJ2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Rnf168Q80XJ2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Rnf168Q80XJ2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rnf168Q80XJ2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.1■■□□□ 1.45
Rnf168Q80XJ2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rnf168Q80XJ2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rnf168Q80XJ2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rnf168Q80XJ2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rnf168Q80XJ2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rnf168Q80XJ2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rnf168Q80XJ2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
Rnf168Q80XJ2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.08■■□□□ 1.45
Rnf168Q80XJ2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rnf168Q80XJ2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Rnf168Q80XJ2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Rnf168Q80XJ2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Rnf168Q80XJ2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.07■■□□□ 1.44
Rnf168Q80XJ2 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.07■■□□□ 1.44
Rnf168Q80XJ2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Rnf168Q80XJ2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Rnf168Q80XJ2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Rnf168Q80XJ2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf168Q80XJ2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf168Q80XJ2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.06■■□□□ 1.44
Rnf168Q80XJ2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Rnf168Q80XJ2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Rnf168Q80XJ2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf168Q80XJ2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf168Q80XJ2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf168Q80XJ2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf168Q80XJ2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf168Q80XJ2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf168Q80XJ2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf168Q80XJ2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.04■■□□□ 1.44
Rnf168Q80XJ2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Rnf168Q80XJ2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.04■■□□□ 1.44
Rnf168Q80XJ2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf168Q80XJ2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf168Q80XJ2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf168Q80XJ2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.04■■□□□ 1.44
Rnf168Q80XJ2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf168Q80XJ2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf168Q80XJ2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf168Q80XJ2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rnf168Q80XJ2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Rnf168Q80XJ2 Gm10420-201ENSMUST00000121713 882 ntBASIC24.02■■□□□ 1.44
Rnf168Q80XJ2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rnf168Q80XJ2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rnf168Q80XJ2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf168Q80XJ2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.01■■□□□ 1.43
Rnf168Q80XJ2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Rnf168Q80XJ2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf168Q80XJ2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf168Q80XJ2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Rnf168Q80XJ2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf168Q80XJ2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 148.5 ms