Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Vrk1Q80X41 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vrk1Q80X41 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.79■■□□□ 1.08
Vrk1Q80X41 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.78■■□□□ 1.08
Vrk1Q80X41 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vrk1Q80X41 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vrk1Q80X41 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vrk1Q80X41 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vrk1Q80X41 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vrk1Q80X41 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vrk1Q80X41 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.77■■□□□ 1.08
Vrk1Q80X41 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vrk1Q80X41 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Vrk1Q80X41 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vrk1Q80X41 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Vrk1Q80X41 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vrk1Q80X41 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Vrk1Q80X41 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Vrk1Q80X41 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vrk1Q80X41 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vrk1Q80X41 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.74■■□□□ 1.07
Vrk1Q80X41 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vrk1Q80X41 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.73■■□□□ 1.07
Vrk1Q80X41 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vrk1Q80X41 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vrk1Q80X41 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vrk1Q80X41 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vrk1Q80X41 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.72■■□□□ 1.07
Vrk1Q80X41 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vrk1Q80X41 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vrk1Q80X41 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vrk1Q80X41 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Vrk1Q80X41 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vrk1Q80X41 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vrk1Q80X41 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vrk1Q80X41 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vrk1Q80X41 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Vrk1Q80X41 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Vrk1Q80X41 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.68■■□□□ 1.06
Vrk1Q80X41 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vrk1Q80X41 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vrk1Q80X41 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vrk1Q80X41 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.68■■□□□ 1.06
Vrk1Q80X41 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Vrk1Q80X41 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.67■■□□□ 1.06
Vrk1Q80X41 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vrk1Q80X41 Gm44428-201ENSMUST00000204474 874 ntBASIC21.67■■□□□ 1.06
Vrk1Q80X41 Gm5921-201ENSMUST00000075898 882 ntBASIC21.67■■□□□ 1.06
Vrk1Q80X41 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Vrk1Q80X41 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vrk1Q80X41 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Vrk1Q80X41 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Vrk1Q80X41 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vrk1Q80X41 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vrk1Q80X41 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.66■■□□□ 1.06
Vrk1Q80X41 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Vrk1Q80X41 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.65■■□□□ 1.06
Vrk1Q80X41 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vrk1Q80X41 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vrk1Q80X41 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vrk1Q80X41 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vrk1Q80X41 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Vrk1Q80X41 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vrk1Q80X41 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vrk1Q80X41 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Vrk1Q80X41 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.62■■□□□ 1.05
Vrk1Q80X41 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vrk1Q80X41 Gm5812-201ENSMUST00000061073 957 ntBASIC21.62■■□□□ 1.05
Vrk1Q80X41 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.62■■□□□ 1.05
Vrk1Q80X41 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vrk1Q80X41 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
Vrk1Q80X41 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.61■■□□□ 1.05
Vrk1Q80X41 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vrk1Q80X41 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vrk1Q80X41 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vrk1Q80X41 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.58■■□□□ 1.05
Vrk1Q80X41 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vrk1Q80X41 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vrk1Q80X41 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vrk1Q80X41 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vrk1Q80X41 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vrk1Q80X41 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vrk1Q80X41 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vrk1Q80X41 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vrk1Q80X41 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vrk1Q80X41 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vrk1Q80X41 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vrk1Q80X41 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vrk1Q80X41 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vrk1Q80X41 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vrk1Q80X41 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vrk1Q80X41 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vrk1Q80X41 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vrk1Q80X41 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vrk1Q80X41 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Vrk1Q80X41 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vrk1Q80X41 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.55■■□□□ 1.04
Vrk1Q80X41 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Vrk1Q80X41 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vrk1Q80X41 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms