Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.77■■□□□ 1.08
Trim36Q80WG7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Trim36Q80WG7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trim36Q80WG7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim36Q80WG7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trim36Q80WG7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim36Q80WG7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim36Q80WG7 Gm11599-201ENSMUST00000118720 878 ntBASIC21.75■■□□□ 1.07
Trim36Q80WG7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.75■■□□□ 1.07
Trim36Q80WG7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim36Q80WG7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.74■■□□□ 1.07
Trim36Q80WG7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim36Q80WG7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Trim36Q80WG7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim36Q80WG7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.74■■□□□ 1.07
Trim36Q80WG7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim36Q80WG7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim36Q80WG7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.73■■□□□ 1.07
Trim36Q80WG7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim36Q80WG7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim36Q80WG7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim36Q80WG7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim36Q80WG7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim36Q80WG7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim36Q80WG7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim36Q80WG7 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.71■■□□□ 1.07
Trim36Q80WG7 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.71■■□□□ 1.07
Trim36Q80WG7 Particl-201ENSMUST00000205370 1560 ntBASIC21.7■■□□□ 1.06
Trim36Q80WG7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim36Q80WG7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
Trim36Q80WG7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim36Q80WG7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trim36Q80WG7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim36Q80WG7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim36Q80WG7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim36Q80WG7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
Trim36Q80WG7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Trim36Q80WG7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Trim36Q80WG7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trim36Q80WG7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim36Q80WG7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim36Q80WG7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim36Q80WG7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim36Q80WG7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim36Q80WG7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
Trim36Q80WG7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Trim36Q80WG7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim36Q80WG7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim36Q80WG7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim36Q80WG7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim36Q80WG7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Trim36Q80WG7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim36Q80WG7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Trim36Q80WG7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trim36Q80WG7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim36Q80WG7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trim36Q80WG7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim36Q80WG7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Trim36Q80WG7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.63■■□□□ 1.05
Trim36Q80WG7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim36Q80WG7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim36Q80WG7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim36Q80WG7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim36Q80WG7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim36Q80WG7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim36Q80WG7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim36Q80WG7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim36Q80WG7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim36Q80WG7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim36Q80WG7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trim36Q80WG7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim36Q80WG7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Trim36Q80WG7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim36Q80WG7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim36Q80WG7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim36Q80WG7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim36Q80WG7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim36Q80WG7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim36Q80WG7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim36Q80WG7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Trim36Q80WG7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trim36Q80WG7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim36Q80WG7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim36Q80WG7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.57■■□□□ 1.04
Trim36Q80WG7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim36Q80WG7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim36Q80WG7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim36Q80WG7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim36Q80WG7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Trim36Q80WG7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
Trim36Q80WG7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim36Q80WG7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim36Q80WG7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim36Q80WG7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim36Q80WG7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim36Q80WG7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.54■■□□□ 1.04
Trim36Q80WG7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Trim36Q80WG7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim36Q80WG7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim36Q80WG7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms