Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tnrc18Q80WC3 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.58■■□□□ 1.37
Tnrc18Q80WC3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tnrc18Q80WC3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Tnrc18Q80WC3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Tnrc18Q80WC3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
Tnrc18Q80WC3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
Tnrc18Q80WC3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.57■■□□□ 1.36
Tnrc18Q80WC3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
Tnrc18Q80WC3 Gm15820-201ENSMUST00000201566 728 ntBASIC23.56■■□□□ 1.36
Tnrc18Q80WC3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tnrc18Q80WC3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Tnrc18Q80WC3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tnrc18Q80WC3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tnrc18Q80WC3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.54■■□□□ 1.36
Tnrc18Q80WC3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.54■■□□□ 1.36
Tnrc18Q80WC3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.54■■□□□ 1.36
Tnrc18Q80WC3 Terc-201ENSMUST00000082862 423 ntBASIC23.54■■□□□ 1.36
Tnrc18Q80WC3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Tnrc18Q80WC3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Tnrc18Q80WC3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tnrc18Q80WC3 Gm45444-201ENSMUST00000211394 898 ntBASIC23.52■■□□□ 1.36
Tnrc18Q80WC3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tnrc18Q80WC3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tnrc18Q80WC3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tnrc18Q80WC3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Tnrc18Q80WC3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Tnrc18Q80WC3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tnrc18Q80WC3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tnrc18Q80WC3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
Tnrc18Q80WC3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tnrc18Q80WC3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Tnrc18Q80WC3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.5■■□□□ 1.35
Tnrc18Q80WC3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tnrc18Q80WC3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tnrc18Q80WC3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tnrc18Q80WC3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tnrc18Q80WC3 Gm9959-201ENSMUST00000068277 390 ntBASIC23.49■■□□□ 1.35
Tnrc18Q80WC3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tnrc18Q80WC3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tnrc18Q80WC3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tnrc18Q80WC3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Tnrc18Q80WC3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tnrc18Q80WC3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
Tnrc18Q80WC3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tnrc18Q80WC3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tnrc18Q80WC3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tnrc18Q80WC3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tnrc18Q80WC3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Tnrc18Q80WC3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.46■■□□□ 1.35
Tnrc18Q80WC3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.46■■□□□ 1.35
Tnrc18Q80WC3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.46■■□□□ 1.35
Tnrc18Q80WC3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tnrc18Q80WC3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Tnrc18Q80WC3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tnrc18Q80WC3 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.45■■□□□ 1.34
Tnrc18Q80WC3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.44■■□□□ 1.34
Tnrc18Q80WC3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Tnrc18Q80WC3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tnrc18Q80WC3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tnrc18Q80WC3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tnrc18Q80WC3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.43■■□□□ 1.34
Tnrc18Q80WC3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.43■■□□□ 1.34
Tnrc18Q80WC3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.42■■□□□ 1.34
Tnrc18Q80WC3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tnrc18Q80WC3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tnrc18Q80WC3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tnrc18Q80WC3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tnrc18Q80WC3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.41■■□□□ 1.34
Tnrc18Q80WC3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tnrc18Q80WC3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Tnrc18Q80WC3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.4■■□□□ 1.34
Tnrc18Q80WC3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Tnrc18Q80WC3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.4■■□□□ 1.34
Tnrc18Q80WC3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Tnrc18Q80WC3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Tnrc18Q80WC3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Tnrc18Q80WC3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Tnrc18Q80WC3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tnrc18Q80WC3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Tnrc18Q80WC3 Gm44428-201ENSMUST00000204474 874 ntBASIC23.38■■□□□ 1.33
Tnrc18Q80WC3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Tnrc18Q80WC3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Tnrc18Q80WC3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Tnrc18Q80WC3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.37■■□□□ 1.33
Tnrc18Q80WC3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Tnrc18Q80WC3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.36■■□□□ 1.33
Tnrc18Q80WC3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Tnrc18Q80WC3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.35■■□□□ 1.33
Tnrc18Q80WC3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tnrc18Q80WC3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tnrc18Q80WC3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Tnrc18Q80WC3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Tnrc18Q80WC3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Tnrc18Q80WC3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Tnrc18Q80WC3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.33■■□□□ 1.32
Tnrc18Q80WC3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.32■■□□□ 1.32
Tnrc18Q80WC3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Tnrc18Q80WC3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Tnrc18Q80WC3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms