Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdh19Q80TF3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdh19Q80TF3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdh19Q80TF3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdh19Q80TF3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdh19Q80TF3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.37■■□□□ 1.17
Pcdh19Q80TF3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdh19Q80TF3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdh19Q80TF3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdh19Q80TF3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdh19Q80TF3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdh19Q80TF3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pcdh19Q80TF3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdh19Q80TF3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdh19Q80TF3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdh19Q80TF3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdh19Q80TF3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.35■■□□□ 1.17
Pcdh19Q80TF3 Gm7332-201ENSMUST00000118351 454 ntBASIC22.34■■□□□ 1.17
Pcdh19Q80TF3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.34■■□□□ 1.17
Pcdh19Q80TF3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdh19Q80TF3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Pcdh19Q80TF3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh19Q80TF3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdh19Q80TF3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh19Q80TF3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh19Q80TF3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh19Q80TF3 Gm14523-201ENSMUST00000117260 558 ntBASIC22.31■■□□□ 1.16
Pcdh19Q80TF3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh19Q80TF3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.31■■□□□ 1.16
Pcdh19Q80TF3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdh19Q80TF3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Pcdh19Q80TF3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh19Q80TF3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Pcdh19Q80TF3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh19Q80TF3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Pcdh19Q80TF3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcdh19Q80TF3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh19Q80TF3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh19Q80TF3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh19Q80TF3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
Pcdh19Q80TF3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdh19Q80TF3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh19Q80TF3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Pcdh19Q80TF3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.27■■□□□ 1.16
Pcdh19Q80TF3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdh19Q80TF3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdh19Q80TF3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh19Q80TF3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.26■■□□□ 1.15
Pcdh19Q80TF3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh19Q80TF3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh19Q80TF3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdh19Q80TF3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh19Q80TF3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh19Q80TF3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh19Q80TF3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.23■■□□□ 1.15
Pcdh19Q80TF3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh19Q80TF3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh19Q80TF3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh19Q80TF3 Gm44428-201ENSMUST00000204474 874 ntBASIC22.22■■□□□ 1.15
Pcdh19Q80TF3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pcdh19Q80TF3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh19Q80TF3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdh19Q80TF3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh19Q80TF3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh19Q80TF3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh19Q80TF3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Pcdh19Q80TF3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdh19Q80TF3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdh19Q80TF3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.19■■□□□ 1.14
Pcdh19Q80TF3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdh19Q80TF3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdh19Q80TF3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh19Q80TF3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh19Q80TF3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.18■■□□□ 1.14
Pcdh19Q80TF3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Pcdh19Q80TF3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdh19Q80TF3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Pcdh19Q80TF3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh19Q80TF3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.17■■□□□ 1.14
Pcdh19Q80TF3 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.17■■□□□ 1.14
Pcdh19Q80TF3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh19Q80TF3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh19Q80TF3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh19Q80TF3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh19Q80TF3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.16■■□□□ 1.14
Pcdh19Q80TF3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
Pcdh19Q80TF3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh19Q80TF3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh19Q80TF3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
Pcdh19Q80TF3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Pcdh19Q80TF3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.15■■□□□ 1.14
Pcdh19Q80TF3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh19Q80TF3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdh19Q80TF3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.14■■□□□ 1.13
Pcdh19Q80TF3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh19Q80TF3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh19Q80TF3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh19Q80TF3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Pcdh19Q80TF3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh19Q80TF3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms