Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC36.43■■■■□ 3.42
Rpap1Q80TE0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Rpap1Q80TE0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Rpap1Q80TE0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Rpap1Q80TE0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC36.42■■■■□ 3.42
Rpap1Q80TE0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC36.42■■■■□ 3.42
Rpap1Q80TE0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC36.42■■■■□ 3.42
Rpap1Q80TE0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC36.42■■■■□ 3.42
Rpap1Q80TE0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC36.42■■■■□ 3.42
Rpap1Q80TE0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC36.41■■■■□ 3.42
Rpap1Q80TE0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Rpap1Q80TE0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC36.41■■■■□ 3.42
Rpap1Q80TE0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC36.41■■■■□ 3.42
Rpap1Q80TE0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC36.4■■■■□ 3.42
Rpap1Q80TE0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
Rpap1Q80TE0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC36.4■■■■□ 3.42
Rpap1Q80TE0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Rpap1Q80TE0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Rpap1Q80TE0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Rpap1Q80TE0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
Rpap1Q80TE0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
Rpap1Q80TE0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Rpap1Q80TE0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC36.36■■■■□ 3.41
Rpap1Q80TE0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC36.36■■■■□ 3.41
Rpap1Q80TE0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC36.36■■■■□ 3.41
Rpap1Q80TE0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
Rpap1Q80TE0 Gm13238-201ENSMUST00000117655 780 ntBASIC36.34■■■■□ 3.41
Rpap1Q80TE0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Rpap1Q80TE0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Rpap1Q80TE0 AC093043.1-201ENSMUST00000226700 898 ntBASIC36.34■■■■□ 3.41
Rpap1Q80TE0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC36.33■■■■□ 3.41
Rpap1Q80TE0 Gm44428-201ENSMUST00000204474 874 ntBASIC36.33■■■■□ 3.41
Rpap1Q80TE0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Rpap1Q80TE0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC36.32■■■■□ 3.4
Rpap1Q80TE0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Rpap1Q80TE0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC36.32■■■■□ 3.4
Rpap1Q80TE0 Gm4419-202ENSMUST00000226239 1431 ntBASIC36.31■■■■□ 3.4
Rpap1Q80TE0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC36.29■■■■□ 3.4
Rpap1Q80TE0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Rpap1Q80TE0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Rpap1Q80TE0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC36.27■■■■□ 3.4
Rpap1Q80TE0 Gm6206-201ENSMUST00000133472 2199 ntBASIC36.26■■■■□ 3.4
Rpap1Q80TE0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC36.26■■■■□ 3.4
Rpap1Q80TE0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC36.26■■■■□ 3.4
Rpap1Q80TE0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.39
Rpap1Q80TE0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC36.25■■■■□ 3.39
Rpap1Q80TE0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC36.25■■■■□ 3.39
Rpap1Q80TE0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC36.25■■■■□ 3.39
Rpap1Q80TE0 Gm43566-201ENSMUST00000196851 808 ntBASIC36.24■■■■□ 3.39
Rpap1Q80TE0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Rpap1Q80TE0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC36.21■■■■□ 3.39
Rpap1Q80TE0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Rpap1Q80TE0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Rpap1Q80TE0 Gm15820-201ENSMUST00000201566 728 ntBASIC36.21■■■■□ 3.39
Rpap1Q80TE0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC36.21■■■■□ 3.39
Rpap1Q80TE0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC36.2■■■■□ 3.39
Rpap1Q80TE0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC36.2■■■■□ 3.39
Rpap1Q80TE0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC36.2■■■■□ 3.39
Rpap1Q80TE0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC36.19■■■■□ 3.38
Rpap1Q80TE0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC36.19■■■■□ 3.38
Rpap1Q80TE0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
Rpap1Q80TE0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC36.19■■■■□ 3.38
Rpap1Q80TE0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Rpap1Q80TE0 Gm43592-201ENSMUST00000196922 1165 ntBASIC36.17■■■■□ 3.38
Rpap1Q80TE0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Rpap1Q80TE0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC36.17■■■■□ 3.38
Rpap1Q80TE0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC36.16■■■■□ 3.38
Rpap1Q80TE0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC36.16■■■■□ 3.38
Rpap1Q80TE0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Rpap1Q80TE0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC36.16■■■■□ 3.38
Rpap1Q80TE0 Rps24-207ENSMUST00000224568 714 ntBASIC36.15■■■■□ 3.38
Rpap1Q80TE0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Rpap1Q80TE0 Nsd1-203ENSMUST00000224156 1149 ntBASIC36.14■■■■□ 3.38
Rpap1Q80TE0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
Rpap1Q80TE0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC36.12■■■■□ 3.37
Rpap1Q80TE0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC36.12■■■■□ 3.37
Rpap1Q80TE0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
Rpap1Q80TE0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC36.12■■■■□ 3.37
Rpap1Q80TE0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC36.12■■■■□ 3.37
Rpap1Q80TE0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Rpap1Q80TE0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Rpap1Q80TE0 Gm45444-201ENSMUST00000211394 898 ntBASIC36.1■■■■□ 3.37
Rpap1Q80TE0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Rpap1Q80TE0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC36.08■■■■□ 3.37
Rpap1Q80TE0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Rpap1Q80TE0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Rpap1Q80TE0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC36.07■■■■□ 3.37
Rpap1Q80TE0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC36.07■■■■□ 3.37
Rpap1Q80TE0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC36.07■■■■□ 3.36
Rpap1Q80TE0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Rpap1Q80TE0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC36.06■■■■□ 3.36
Rpap1Q80TE0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
Rpap1Q80TE0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC36.03■■■■□ 3.36
Rpap1Q80TE0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Rpap1Q80TE0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC36.03■■■■□ 3.36
Rpap1Q80TE0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Rpap1Q80TE0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Rpap1Q80TE0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC36.01■■■■□ 3.36
Rpap1Q80TE0 Gm14117-201ENSMUST00000122417 843 ntBASIC36■■■■□ 3.35
Rpap1Q80TE0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms