Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pif1Q80SX8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pif1Q80SX8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pif1Q80SX8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.03■□□□□ 0.96
Pif1Q80SX8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pif1Q80SX8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pif1Q80SX8 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.02■□□□□ 0.96
Pif1Q80SX8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pif1Q80SX8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pif1Q80SX8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pif1Q80SX8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Pif1Q80SX8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pif1Q80SX8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pif1Q80SX8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Pif1Q80SX8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pif1Q80SX8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pif1Q80SX8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pif1Q80SX8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pif1Q80SX8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pif1Q80SX8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pif1Q80SX8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Pif1Q80SX8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.96■□□□□ 0.95
Pif1Q80SX8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pif1Q80SX8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.96■□□□□ 0.95
Pif1Q80SX8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pif1Q80SX8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.95■□□□□ 0.95
Pif1Q80SX8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pif1Q80SX8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pif1Q80SX8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pif1Q80SX8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pif1Q80SX8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.94■□□□□ 0.94
Pif1Q80SX8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pif1Q80SX8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pif1Q80SX8 Gm5921-201ENSMUST00000075898 882 ntBASIC20.94■□□□□ 0.94
Pif1Q80SX8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pif1Q80SX8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pif1Q80SX8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pif1Q80SX8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
Pif1Q80SX8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pif1Q80SX8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pif1Q80SX8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pif1Q80SX8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pif1Q80SX8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pif1Q80SX8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Gm5812-201ENSMUST00000061073 957 ntBASIC20.9■□□□□ 0.94
Pif1Q80SX8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pif1Q80SX8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pif1Q80SX8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pif1Q80SX8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.89■□□□□ 0.93
Pif1Q80SX8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pif1Q80SX8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pif1Q80SX8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pif1Q80SX8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.88■□□□□ 0.93
Pif1Q80SX8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pif1Q80SX8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pif1Q80SX8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pif1Q80SX8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pif1Q80SX8 Gm44428-201ENSMUST00000204474 874 ntBASIC20.87■□□□□ 0.93
Pif1Q80SX8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pif1Q80SX8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.86■□□□□ 0.93
Pif1Q80SX8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.86■□□□□ 0.93
Pif1Q80SX8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pif1Q80SX8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pif1Q80SX8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pif1Q80SX8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pif1Q80SX8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pif1Q80SX8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pif1Q80SX8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pif1Q80SX8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.84■□□□□ 0.93
Pif1Q80SX8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.84■□□□□ 0.93
Pif1Q80SX8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pif1Q80SX8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pif1Q80SX8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Pif1Q80SX8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.81■□□□□ 0.92
Pif1Q80SX8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.8■□□□□ 0.92
Pif1Q80SX8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pif1Q80SX8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pif1Q80SX8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pif1Q80SX8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pif1Q80SX8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pif1Q80SX8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pif1Q80SX8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pif1Q80SX8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pif1Q80SX8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pif1Q80SX8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pif1Q80SX8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pif1Q80SX8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pif1Q80SX8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pif1Q80SX8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms