Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Scn10aQ6QIY3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Scn10aQ6QIY3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Scn10aQ6QIY3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.87■■□□□ 1.89
Scn10aQ6QIY3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Scn10aQ6QIY3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Scn10aQ6QIY3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.86■■□□□ 1.89
Scn10aQ6QIY3 Gm13238-201ENSMUST00000117655 780 ntBASIC26.86■■□□□ 1.89
Scn10aQ6QIY3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Scn10aQ6QIY3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Scn10aQ6QIY3 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.84■■□□□ 1.89
Scn10aQ6QIY3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Scn10aQ6QIY3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
Scn10aQ6QIY3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Scn10aQ6QIY3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Scn10aQ6QIY3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Scn10aQ6QIY3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Scn10aQ6QIY3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Scn10aQ6QIY3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Scn10aQ6QIY3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Scn10aQ6QIY3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Scn10aQ6QIY3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Scn10aQ6QIY3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 Gm45444-201ENSMUST00000211394 898 ntBASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.77■■□□□ 1.88
Scn10aQ6QIY3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Scn10aQ6QIY3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.76■■□□□ 1.87
Scn10aQ6QIY3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Scn10aQ6QIY3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Scn10aQ6QIY3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Scn10aQ6QIY3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.74■■□□□ 1.87
Scn10aQ6QIY3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Scn10aQ6QIY3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Scn10aQ6QIY3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Scn10aQ6QIY3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.73■■□□□ 1.87
Scn10aQ6QIY3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Scn10aQ6QIY3 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.7■■□□□ 1.87
Scn10aQ6QIY3 Gm15820-201ENSMUST00000201566 728 ntBASIC26.7■■□□□ 1.86
Scn10aQ6QIY3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Scn10aQ6QIY3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Scn10aQ6QIY3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Scn10aQ6QIY3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.69■■□□□ 1.86
Scn10aQ6QIY3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Scn10aQ6QIY3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Scn10aQ6QIY3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.69■■□□□ 1.86
Scn10aQ6QIY3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Scn10aQ6QIY3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Scn10aQ6QIY3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Scn10aQ6QIY3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Scn10aQ6QIY3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Scn10aQ6QIY3 Rps24-207ENSMUST00000224568 714 ntBASIC26.66■■□□□ 1.86
Scn10aQ6QIY3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Scn10aQ6QIY3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.65■■□□□ 1.86
Scn10aQ6QIY3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Scn10aQ6QIY3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Scn10aQ6QIY3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Scn10aQ6QIY3 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.63■■□□□ 1.85
Scn10aQ6QIY3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Scn10aQ6QIY3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Scn10aQ6QIY3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Scn10aQ6QIY3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Scn10aQ6QIY3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Scn10aQ6QIY3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.62■■□□□ 1.85
Scn10aQ6QIY3 Gm14117-201ENSMUST00000122417 843 ntBASIC26.61■■□□□ 1.85
Scn10aQ6QIY3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Scn10aQ6QIY3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.59■■□□□ 1.85
Scn10aQ6QIY3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.59■■□□□ 1.85
Scn10aQ6QIY3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scn10aQ6QIY3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scn10aQ6QIY3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scn10aQ6QIY3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Scn10aQ6QIY3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Scn10aQ6QIY3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.57■■□□□ 1.84
Scn10aQ6QIY3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Scn10aQ6QIY3 Gm45102-201ENSMUST00000207427 857 ntBASIC26.56■■□□□ 1.84
Scn10aQ6QIY3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
Scn10aQ6QIY3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Scn10aQ6QIY3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms