Protein–RNA interactions for Protein: Q6PGE7

Slc6a7, Sodium-dependent proline transporter, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a7Q6PGE7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a7Q6PGE7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a7Q6PGE7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a7Q6PGE7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a7Q6PGE7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a7Q6PGE7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Slc6a7Q6PGE7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a7Q6PGE7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Slc6a7Q6PGE7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a7Q6PGE7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a7Q6PGE7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a7Q6PGE7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.5■□□□□ 0.87
Slc6a7Q6PGE7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a7Q6PGE7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a7Q6PGE7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.5■□□□□ 0.87
Slc6a7Q6PGE7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.5■□□□□ 0.87
Slc6a7Q6PGE7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a7Q6PGE7 Particl-201ENSMUST00000205370 1560 ntBASIC20.5■□□□□ 0.87
Slc6a7Q6PGE7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a7Q6PGE7 Gm30023-201ENSMUST00000197970 889 ntBASIC20.49■□□□□ 0.87
Slc6a7Q6PGE7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a7Q6PGE7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a7Q6PGE7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a7Q6PGE7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a7Q6PGE7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a7Q6PGE7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a7Q6PGE7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a7Q6PGE7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a7Q6PGE7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.47■□□□□ 0.87
Slc6a7Q6PGE7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.46■□□□□ 0.87
Slc6a7Q6PGE7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Slc6a7Q6PGE7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.46■□□□□ 0.87
Slc6a7Q6PGE7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a7Q6PGE7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Slc6a7Q6PGE7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.45■□□□□ 0.86
Slc6a7Q6PGE7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a7Q6PGE7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a7Q6PGE7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a7Q6PGE7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.45■□□□□ 0.86
Slc6a7Q6PGE7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a7Q6PGE7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a7Q6PGE7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.45■□□□□ 0.86
Slc6a7Q6PGE7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a7Q6PGE7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a7Q6PGE7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a7Q6PGE7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Slc6a7Q6PGE7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Slc6a7Q6PGE7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a7Q6PGE7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a7Q6PGE7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a7Q6PGE7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc6a7Q6PGE7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Slc6a7Q6PGE7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a7Q6PGE7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a7Q6PGE7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a7Q6PGE7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a7Q6PGE7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.42■□□□□ 0.86
Slc6a7Q6PGE7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.42■□□□□ 0.86
Slc6a7Q6PGE7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a7Q6PGE7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a7Q6PGE7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Slc6a7Q6PGE7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Slc6a7Q6PGE7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a7Q6PGE7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.41■□□□□ 0.86
Slc6a7Q6PGE7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a7Q6PGE7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a7Q6PGE7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Slc6a7Q6PGE7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.4■□□□□ 0.86
Slc6a7Q6PGE7 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.39■□□□□ 0.86
Slc6a7Q6PGE7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a7Q6PGE7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a7Q6PGE7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Slc6a7Q6PGE7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a7Q6PGE7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.38■□□□□ 0.85
Slc6a7Q6PGE7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a7Q6PGE7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
Slc6a7Q6PGE7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a7Q6PGE7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a7Q6PGE7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a7Q6PGE7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a7Q6PGE7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a7Q6PGE7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a7Q6PGE7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a7Q6PGE7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a7Q6PGE7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Slc6a7Q6PGE7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a7Q6PGE7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a7Q6PGE7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a7Q6PGE7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a7Q6PGE7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a7Q6PGE7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a7Q6PGE7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a7Q6PGE7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a7Q6PGE7 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.35■□□□□ 0.85
Slc6a7Q6PGE7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a7Q6PGE7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a7Q6PGE7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a7Q6PGE7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Slc6a7Q6PGE7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.34■□□□□ 0.85
Slc6a7Q6PGE7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms