Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc46a1Q6PEM8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Slc46a1Q6PEM8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc46a1Q6PEM8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Slc46a1Q6PEM8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc46a1Q6PEM8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.94■□□□□ 0.78
Slc46a1Q6PEM8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc46a1Q6PEM8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc46a1Q6PEM8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc46a1Q6PEM8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc46a1Q6PEM8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc46a1Q6PEM8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc46a1Q6PEM8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Slc46a1Q6PEM8 Gm7332-201ENSMUST00000118351 454 ntBASIC19.93■□□□□ 0.78
Slc46a1Q6PEM8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.93■□□□□ 0.78
Slc46a1Q6PEM8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Slc46a1Q6PEM8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc46a1Q6PEM8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc46a1Q6PEM8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc46a1Q6PEM8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Slc46a1Q6PEM8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Slc46a1Q6PEM8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc46a1Q6PEM8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Slc46a1Q6PEM8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc46a1Q6PEM8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Slc46a1Q6PEM8 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.91■□□□□ 0.78
Slc46a1Q6PEM8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc46a1Q6PEM8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Slc46a1Q6PEM8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Slc46a1Q6PEM8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.9■□□□□ 0.78
Slc46a1Q6PEM8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slc46a1Q6PEM8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slc46a1Q6PEM8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc46a1Q6PEM8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Slc46a1Q6PEM8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Slc46a1Q6PEM8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc46a1Q6PEM8 Gm14523-201ENSMUST00000117260 558 ntBASIC19.89■□□□□ 0.77
Slc46a1Q6PEM8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc46a1Q6PEM8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc46a1Q6PEM8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc46a1Q6PEM8 Terc-201ENSMUST00000082862 423 ntBASIC19.89■□□□□ 0.77
Slc46a1Q6PEM8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Slc46a1Q6PEM8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc46a1Q6PEM8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slc46a1Q6PEM8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc46a1Q6PEM8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.88■□□□□ 0.77
Slc46a1Q6PEM8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Slc46a1Q6PEM8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Slc46a1Q6PEM8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc46a1Q6PEM8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc46a1Q6PEM8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.87■□□□□ 0.77
Slc46a1Q6PEM8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.87■□□□□ 0.77
Slc46a1Q6PEM8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Slc46a1Q6PEM8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc46a1Q6PEM8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Slc46a1Q6PEM8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc46a1Q6PEM8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc46a1Q6PEM8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc46a1Q6PEM8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc46a1Q6PEM8 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.85■□□□□ 0.77
Slc46a1Q6PEM8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Slc46a1Q6PEM8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc46a1Q6PEM8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Slc46a1Q6PEM8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.84■□□□□ 0.77
Slc46a1Q6PEM8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.84■□□□□ 0.77
Slc46a1Q6PEM8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc46a1Q6PEM8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc46a1Q6PEM8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.84■□□□□ 0.77
Slc46a1Q6PEM8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc46a1Q6PEM8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc46a1Q6PEM8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Slc46a1Q6PEM8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Slc46a1Q6PEM8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.83■□□□□ 0.76
Slc46a1Q6PEM8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc46a1Q6PEM8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc46a1Q6PEM8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slc46a1Q6PEM8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc46a1Q6PEM8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc46a1Q6PEM8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Slc46a1Q6PEM8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc46a1Q6PEM8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc46a1Q6PEM8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc46a1Q6PEM8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc46a1Q6PEM8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc46a1Q6PEM8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Slc46a1Q6PEM8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc46a1Q6PEM8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc46a1Q6PEM8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Slc46a1Q6PEM8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc46a1Q6PEM8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.79■□□□□ 0.76
Slc46a1Q6PEM8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc46a1Q6PEM8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.79■□□□□ 0.76
Slc46a1Q6PEM8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.79■□□□□ 0.76
Slc46a1Q6PEM8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc46a1Q6PEM8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc46a1Q6PEM8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc46a1Q6PEM8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc46a1Q6PEM8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.77■□□□□ 0.76
Slc46a1Q6PEM8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc46a1Q6PEM8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms