Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.49■■□□□ 1.83
Usp50Q6P8X6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.49■■□□□ 1.83
Usp50Q6P8X6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Usp50Q6P8X6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Usp50Q6P8X6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Usp50Q6P8X6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Usp50Q6P8X6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Usp50Q6P8X6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Usp50Q6P8X6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Usp50Q6P8X6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Usp50Q6P8X6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Usp50Q6P8X6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Usp50Q6P8X6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.46■■□□□ 1.83
Usp50Q6P8X6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Usp50Q6P8X6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.82
Usp50Q6P8X6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp50Q6P8X6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Usp50Q6P8X6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp50Q6P8X6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.44■■□□□ 1.82
Usp50Q6P8X6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
Usp50Q6P8X6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.43■■□□□ 1.82
Usp50Q6P8X6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Usp50Q6P8X6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.42■■□□□ 1.82
Usp50Q6P8X6 Gm12366-201ENSMUST00000121722 873 ntBASIC26.42■■□□□ 1.82
Usp50Q6P8X6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.42■■□□□ 1.82
Usp50Q6P8X6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.42■■□□□ 1.82
Usp50Q6P8X6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.42■■□□□ 1.82
Usp50Q6P8X6 Gm5786-201ENSMUST00000085368 882 ntBASIC26.42■■□□□ 1.82
Usp50Q6P8X6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp50Q6P8X6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Usp50Q6P8X6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Usp50Q6P8X6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Usp50Q6P8X6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Usp50Q6P8X6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Usp50Q6P8X6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Usp50Q6P8X6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Usp50Q6P8X6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.39■■□□□ 1.82
Usp50Q6P8X6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Usp50Q6P8X6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.39■■□□□ 1.82
Usp50Q6P8X6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Usp50Q6P8X6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.39■■□□□ 1.82
Usp50Q6P8X6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Usp50Q6P8X6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Usp50Q6P8X6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
Usp50Q6P8X6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
Usp50Q6P8X6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Usp50Q6P8X6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Usp50Q6P8X6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Usp50Q6P8X6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Usp50Q6P8X6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Usp50Q6P8X6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Usp50Q6P8X6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Usp50Q6P8X6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Usp50Q6P8X6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Usp50Q6P8X6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
Usp50Q6P8X6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Usp50Q6P8X6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Usp50Q6P8X6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Usp50Q6P8X6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Usp50Q6P8X6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.35■■□□□ 1.81
Usp50Q6P8X6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Usp50Q6P8X6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Usp50Q6P8X6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Usp50Q6P8X6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Usp50Q6P8X6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Usp50Q6P8X6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.33■■□□□ 1.81
Usp50Q6P8X6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Usp50Q6P8X6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Usp50Q6P8X6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Usp50Q6P8X6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.32■■□□□ 1.8
Usp50Q6P8X6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Usp50Q6P8X6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Usp50Q6P8X6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Usp50Q6P8X6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp50Q6P8X6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp50Q6P8X6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Usp50Q6P8X6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
Usp50Q6P8X6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp50Q6P8X6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Usp50Q6P8X6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Usp50Q6P8X6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Usp50Q6P8X6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Usp50Q6P8X6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Usp50Q6P8X6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.29■■□□□ 1.8
Usp50Q6P8X6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Usp50Q6P8X6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Usp50Q6P8X6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.28■■□□□ 1.8
Usp50Q6P8X6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Usp50Q6P8X6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.27■■□□□ 1.8
Usp50Q6P8X6 Gm14523-201ENSMUST00000117260 558 ntBASIC26.26■■□□□ 1.79
Usp50Q6P8X6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Usp50Q6P8X6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp50Q6P8X6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp50Q6P8X6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp50Q6P8X6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Usp50Q6P8X6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.25■■□□□ 1.79
Usp50Q6P8X6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.25■■□□□ 1.79
Usp50Q6P8X6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Usp50Q6P8X6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.25■■□□□ 1.79
Usp50Q6P8X6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms