Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Foxc1Q61572 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Foxc1Q61572 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.41■□□□□ 0.22
Foxc1Q61572 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.41■□□□□ 0.22
Foxc1Q61572 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxc1Q61572 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxc1Q61572 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxc1Q61572 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Foxc1Q61572 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxc1Q61572 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Foxc1Q61572 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxc1Q61572 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxc1Q61572 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxc1Q61572 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Foxc1Q61572 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxc1Q61572 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Foxc1Q61572 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.38■□□□□ 0.21
Foxc1Q61572 Cap2-205ENSMUST00000225824 1634 ntBASIC16.38■□□□□ 0.21
Foxc1Q61572 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxc1Q61572 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.38■□□□□ 0.21
Foxc1Q61572 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxc1Q61572 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxc1Q61572 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Foxc1Q61572 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Foxc1Q61572 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Foxc1Q61572 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Foxc1Q61572 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Foxc1Q61572 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Foxc1Q61572 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Foxc1Q61572 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Foxc1Q61572 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.37■□□□□ 0.21
Foxc1Q61572 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Foxc1Q61572 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Foxc1Q61572 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Foxc1Q61572 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Foxc1Q61572 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxc1Q61572 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxc1Q61572 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxc1Q61572 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxc1Q61572 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxc1Q61572 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Foxc1Q61572 Gm11687-201ENSMUST00000118911 886 ntBASIC16.35■□□□□ 0.21
Foxc1Q61572 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Foxc1Q61572 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Foxc1Q61572 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Foxc1Q61572 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Foxc1Q61572 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxc1Q61572 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.34■□□□□ 0.21
Foxc1Q61572 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.34■□□□□ 0.21
Foxc1Q61572 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.34■□□□□ 0.21
Foxc1Q61572 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxc1Q61572 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxc1Q61572 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxc1Q61572 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Foxc1Q61572 Scarna2-201ENSMUST00000157560 414 ntBASIC16.33■□□□□ 0.2
Foxc1Q61572 Gm45364-201ENSMUST00000210883 159 ntBASIC16.33■□□□□ 0.2
Foxc1Q61572 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxc1Q61572 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.33■□□□□ 0.2
Foxc1Q61572 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxc1Q61572 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxc1Q61572 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Foxc1Q61572 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxc1Q61572 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Foxc1Q61572 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxc1Q61572 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Foxc1Q61572 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxc1Q61572 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.32■□□□□ 0.2
Foxc1Q61572 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.32■□□□□ 0.2
Foxc1Q61572 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxc1Q61572 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxc1Q61572 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxc1Q61572 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxc1Q61572 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxc1Q61572 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.32■□□□□ 0.2
Foxc1Q61572 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Foxc1Q61572 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxc1Q61572 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxc1Q61572 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxc1Q61572 Gm9812-201ENSMUST00000061934 968 ntBASIC16.31■□□□□ 0.2
Foxc1Q61572 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxc1Q61572 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxc1Q61572 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Foxc1Q61572 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxc1Q61572 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxc1Q61572 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxc1Q61572 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxc1Q61572 Gm9806-201ENSMUST00000051080 552 ntBASIC16.3■□□□□ 0.2
Foxc1Q61572 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxc1Q61572 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.29■□□□□ 0.2
Foxc1Q61572 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxc1Q61572 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxc1Q61572 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxc1Q61572 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Foxc1Q61572 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxc1Q61572 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxc1Q61572 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxc1Q61572 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxc1Q61572 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
Foxc1Q61572 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxc1Q61572 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms