Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.88■■■□□ 2.21
Ubr3Q5U430 Gm15820-201ENSMUST00000201566 728 ntBASIC28.88■■■□□ 2.21
Ubr3Q5U430 Gm44428-201ENSMUST00000204474 874 ntBASIC28.88■■■□□ 2.21
Ubr3Q5U430 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
Ubr3Q5U430 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Ubr3Q5U430 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ubr3Q5U430 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Ubr3Q5U430 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ubr3Q5U430 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Ubr3Q5U430 Gm43592-201ENSMUST00000196922 1165 ntBASIC28.84■■■□□ 2.21
Ubr3Q5U430 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ubr3Q5U430 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Ubr3Q5U430 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Ubr3Q5U430 Gm14117-201ENSMUST00000122417 843 ntBASIC28.83■■■□□ 2.2
Ubr3Q5U430 Gm45444-201ENSMUST00000211394 898 ntBASIC28.83■■■□□ 2.2
Ubr3Q5U430 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC28.83■■■□□ 2.2
Ubr3Q5U430 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC28.83■■■□□ 2.2
Ubr3Q5U430 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
Ubr3Q5U430 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ubr3Q5U430 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ubr3Q5U430 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ubr3Q5U430 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ubr3Q5U430 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC28.8■■■□□ 2.2
Ubr3Q5U430 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC28.79■■■□□ 2.2
Ubr3Q5U430 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ubr3Q5U430 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC28.78■■■□□ 2.2
Ubr3Q5U430 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC28.78■■■□□ 2.2
Ubr3Q5U430 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ubr3Q5U430 Rps24-207ENSMUST00000224568 714 ntBASIC28.76■■■□□ 2.2
Ubr3Q5U430 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Ubr3Q5U430 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
Ubr3Q5U430 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Ubr3Q5U430 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Ubr3Q5U430 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ubr3Q5U430 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ubr3Q5U430 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ubr3Q5U430 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC28.71■■■□□ 2.19
Ubr3Q5U430 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ubr3Q5U430 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ubr3Q5U430 Zxda-201ENSMUST00000117281 2621 ntBASIC28.7■■■□□ 2.18
Ubr3Q5U430 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ubr3Q5U430 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ubr3Q5U430 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Ubr3Q5U430 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ubr3Q5U430 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Ubr3Q5U430 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ubr3Q5U430 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.67■■■□□ 2.18
Ubr3Q5U430 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Ubr3Q5U430 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC28.66■■■□□ 2.18
Ubr3Q5U430 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Ubr3Q5U430 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Ubr3Q5U430 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
Ubr3Q5U430 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ubr3Q5U430 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC28.65■■■□□ 2.18
Ubr3Q5U430 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
Ubr3Q5U430 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ubr3Q5U430 Gm45102-201ENSMUST00000207427 857 ntBASIC28.64■■■□□ 2.18
Ubr3Q5U430 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ubr3Q5U430 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ubr3Q5U430 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC28.63■■■□□ 2.17
Ubr3Q5U430 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
Ubr3Q5U430 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC28.63■■■□□ 2.17
Ubr3Q5U430 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Ubr3Q5U430 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.63■■■□□ 2.17
Ubr3Q5U430 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ubr3Q5U430 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ubr3Q5U430 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ubr3Q5U430 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.61■■■□□ 2.17
Ubr3Q5U430 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Ubr3Q5U430 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ubr3Q5U430 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC28.61■■■□□ 2.17
Ubr3Q5U430 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC28.6■■■□□ 2.17
Ubr3Q5U430 Gm37847-201ENSMUST00000192163 1497 ntBASIC28.6■■■□□ 2.17
Ubr3Q5U430 Gm31748-201ENSMUST00000194938 1497 ntBASIC28.6■■■□□ 2.17
Ubr3Q5U430 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ubr3Q5U430 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC28.59■■■□□ 2.17
Ubr3Q5U430 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC28.59■■■□□ 2.17
Ubr3Q5U430 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ubr3Q5U430 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ubr3Q5U430 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC28.58■■■□□ 2.17
Ubr3Q5U430 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.58■■■□□ 2.17
Ubr3Q5U430 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ubr3Q5U430 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
Ubr3Q5U430 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
Ubr3Q5U430 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ubr3Q5U430 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ubr3Q5U430 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.56■■■□□ 2.16
Ubr3Q5U430 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ubr3Q5U430 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Ubr3Q5U430 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC28.55■■■□□ 2.16
Ubr3Q5U430 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ubr3Q5U430 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ubr3Q5U430 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ubr3Q5U430 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
Ubr3Q5U430 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ubr3Q5U430 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Ubr3Q5U430 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ubr3Q5U430 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Ubr3Q5U430 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
Ubr3Q5U430 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms