Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7d-3Q5R1I1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav7d-3Q5R1I1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7d-3Q5R1I1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7d-3Q5R1I1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7d-3Q5R1I1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7d-3Q5R1I1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7d-3Q5R1I1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7d-3Q5R1I1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7d-3Q5R1I1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7d-3Q5R1I1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7d-3Q5R1I1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7d-3Q5R1I1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7d-3Q5R1I1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.56■□□□□ 0.24
Trav7d-3Q5R1I1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7d-3Q5R1I1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7d-3Q5R1I1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7d-3Q5R1I1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav7d-3Q5R1I1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7d-3Q5R1I1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7d-3Q5R1I1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7d-3Q5R1I1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav7d-3Q5R1I1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7d-3Q5R1I1 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.53■□□□□ 0.24
Trav7d-3Q5R1I1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7d-3Q5R1I1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7d-3Q5R1I1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav7d-3Q5R1I1 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.51■□□□□ 0.23
Trav7d-3Q5R1I1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7d-3Q5R1I1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7d-3Q5R1I1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7d-3Q5R1I1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7d-3Q5R1I1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav7d-3Q5R1I1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7d-3Q5R1I1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7d-3Q5R1I1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7d-3Q5R1I1 Gm37136-201ENSMUST00000194368 194 ntBASIC16.5■□□□□ 0.23
Trav7d-3Q5R1I1 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.5■□□□□ 0.23
Trav7d-3Q5R1I1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7d-3Q5R1I1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7d-3Q5R1I1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.49■□□□□ 0.23
Trav7d-3Q5R1I1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav7d-3Q5R1I1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7d-3Q5R1I1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7d-3Q5R1I1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7d-3Q5R1I1 Gm6821-201ENSMUST00000107540 542 ntBASIC16.48■□□□□ 0.23
Trav7d-3Q5R1I1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7d-3Q5R1I1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.48■□□□□ 0.23
Trav7d-3Q5R1I1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7d-3Q5R1I1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7d-3Q5R1I1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav7d-3Q5R1I1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7d-3Q5R1I1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7d-3Q5R1I1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7d-3Q5R1I1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7d-3Q5R1I1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7d-3Q5R1I1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7d-3Q5R1I1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7d-3Q5R1I1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7d-3Q5R1I1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trav7d-3Q5R1I1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav7d-3Q5R1I1 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.45■□□□□ 0.22
Trav7d-3Q5R1I1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7d-3Q5R1I1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7d-3Q5R1I1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7d-3Q5R1I1 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.44■□□□□ 0.22
Trav7d-3Q5R1I1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7d-3Q5R1I1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7d-3Q5R1I1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7d-3Q5R1I1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7d-3Q5R1I1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7d-3Q5R1I1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7d-3Q5R1I1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7d-3Q5R1I1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.43■□□□□ 0.22
Trav7d-3Q5R1I1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7d-3Q5R1I1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav7d-3Q5R1I1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav7d-3Q5R1I1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav7d-3Q5R1I1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7d-3Q5R1I1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7d-3Q5R1I1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trav7d-3Q5R1I1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7d-3Q5R1I1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7d-3Q5R1I1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7d-3Q5R1I1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7d-3Q5R1I1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7d-3Q5R1I1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7d-3Q5R1I1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 296.1 ms