Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
R3hdm4Q4VBF2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
R3hdm4Q4VBF2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
R3hdm4Q4VBF2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
R3hdm4Q4VBF2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
R3hdm4Q4VBF2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.69■■□□□ 1.54
R3hdm4Q4VBF2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
R3hdm4Q4VBF2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
R3hdm4Q4VBF2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
R3hdm4Q4VBF2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
R3hdm4Q4VBF2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
R3hdm4Q4VBF2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
R3hdm4Q4VBF2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
R3hdm4Q4VBF2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
R3hdm4Q4VBF2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
R3hdm4Q4VBF2 Scarna2-201ENSMUST00000157560 414 ntBASIC24.67■■□□□ 1.54
R3hdm4Q4VBF2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
R3hdm4Q4VBF2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
R3hdm4Q4VBF2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
R3hdm4Q4VBF2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.67■■□□□ 1.54
R3hdm4Q4VBF2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
R3hdm4Q4VBF2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
R3hdm4Q4VBF2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
R3hdm4Q4VBF2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
R3hdm4Q4VBF2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.66■■□□□ 1.54
R3hdm4Q4VBF2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
R3hdm4Q4VBF2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.65■■□□□ 1.54
R3hdm4Q4VBF2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
R3hdm4Q4VBF2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
R3hdm4Q4VBF2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
R3hdm4Q4VBF2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
R3hdm4Q4VBF2 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.63■■□□□ 1.53
R3hdm4Q4VBF2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
R3hdm4Q4VBF2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.62■■□□□ 1.53
R3hdm4Q4VBF2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
R3hdm4Q4VBF2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
R3hdm4Q4VBF2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
R3hdm4Q4VBF2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
R3hdm4Q4VBF2 Terc-201ENSMUST00000082862 423 ntBASIC24.61■■□□□ 1.53
R3hdm4Q4VBF2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
R3hdm4Q4VBF2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
R3hdm4Q4VBF2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
R3hdm4Q4VBF2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
R3hdm4Q4VBF2 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.6■■□□□ 1.53
R3hdm4Q4VBF2 Gm16437-201ENSMUST00000025669 507 ntBASIC24.6■■□□□ 1.53
R3hdm4Q4VBF2 Gm9806-201ENSMUST00000051080 552 ntBASIC24.6■■□□□ 1.53
R3hdm4Q4VBF2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
R3hdm4Q4VBF2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
R3hdm4Q4VBF2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
R3hdm4Q4VBF2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.59■■□□□ 1.53
R3hdm4Q4VBF2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.58■■□□□ 1.53
R3hdm4Q4VBF2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
R3hdm4Q4VBF2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
R3hdm4Q4VBF2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
R3hdm4Q4VBF2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
R3hdm4Q4VBF2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
R3hdm4Q4VBF2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
R3hdm4Q4VBF2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
R3hdm4Q4VBF2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
R3hdm4Q4VBF2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
R3hdm4Q4VBF2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
R3hdm4Q4VBF2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
R3hdm4Q4VBF2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
R3hdm4Q4VBF2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
R3hdm4Q4VBF2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
R3hdm4Q4VBF2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
R3hdm4Q4VBF2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
R3hdm4Q4VBF2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
R3hdm4Q4VBF2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
R3hdm4Q4VBF2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.53■■□□□ 1.52
R3hdm4Q4VBF2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
R3hdm4Q4VBF2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
R3hdm4Q4VBF2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
R3hdm4Q4VBF2 Gm11687-201ENSMUST00000118911 886 ntBASIC24.51■■□□□ 1.51
R3hdm4Q4VBF2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.51■■□□□ 1.51
R3hdm4Q4VBF2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
R3hdm4Q4VBF2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
R3hdm4Q4VBF2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
R3hdm4Q4VBF2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
R3hdm4Q4VBF2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
R3hdm4Q4VBF2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.49■■□□□ 1.51
R3hdm4Q4VBF2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
R3hdm4Q4VBF2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
R3hdm4Q4VBF2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
R3hdm4Q4VBF2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
R3hdm4Q4VBF2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
R3hdm4Q4VBF2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
R3hdm4Q4VBF2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
R3hdm4Q4VBF2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
R3hdm4Q4VBF2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
R3hdm4Q4VBF2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
R3hdm4Q4VBF2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
R3hdm4Q4VBF2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
R3hdm4Q4VBF2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.46■■□□□ 1.51
R3hdm4Q4VBF2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
R3hdm4Q4VBF2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
R3hdm4Q4VBF2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.45■■□□□ 1.5
R3hdm4Q4VBF2 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.45■■□□□ 1.5
R3hdm4Q4VBF2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
R3hdm4Q4VBF2 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms