Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf223Q3UV31 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf223Q3UV31 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf223Q3UV31 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.31■■□□□ 1.16
Rnf223Q3UV31 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf223Q3UV31 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf223Q3UV31 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Rnf223Q3UV31 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf223Q3UV31 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf223Q3UV31 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf223Q3UV31 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf223Q3UV31 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
Rnf223Q3UV31 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.29■■□□□ 1.16
Rnf223Q3UV31 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf223Q3UV31 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf223Q3UV31 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf223Q3UV31 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Rnf223Q3UV31 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf223Q3UV31 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.28■■□□□ 1.16
Rnf223Q3UV31 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.28■■□□□ 1.16
Rnf223Q3UV31 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf223Q3UV31 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf223Q3UV31 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf223Q3UV31 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf223Q3UV31 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf223Q3UV31 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf223Q3UV31 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Rnf223Q3UV31 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf223Q3UV31 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Rnf223Q3UV31 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf223Q3UV31 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Rnf223Q3UV31 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf223Q3UV31 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf223Q3UV31 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.25■■□□□ 1.15
Rnf223Q3UV31 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf223Q3UV31 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf223Q3UV31 Gm14523-201ENSMUST00000117260 558 ntBASIC22.24■■□□□ 1.15
Rnf223Q3UV31 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.24■■□□□ 1.15
Rnf223Q3UV31 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf223Q3UV31 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf223Q3UV31 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf223Q3UV31 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf223Q3UV31 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf223Q3UV31 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf223Q3UV31 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Rnf223Q3UV31 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Rnf223Q3UV31 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf223Q3UV31 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Rnf223Q3UV31 Gm7332-201ENSMUST00000118351 454 ntBASIC22.21■■□□□ 1.15
Rnf223Q3UV31 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf223Q3UV31 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf223Q3UV31 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf223Q3UV31 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf223Q3UV31 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Rnf223Q3UV31 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.2■■□□□ 1.14
Rnf223Q3UV31 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf223Q3UV31 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf223Q3UV31 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf223Q3UV31 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
Rnf223Q3UV31 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.19■■□□□ 1.14
Rnf223Q3UV31 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Rnf223Q3UV31 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.19■■□□□ 1.14
Rnf223Q3UV31 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Rnf223Q3UV31 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf223Q3UV31 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf223Q3UV31 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Rnf223Q3UV31 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.17■■□□□ 1.14
Rnf223Q3UV31 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf223Q3UV31 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf223Q3UV31 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf223Q3UV31 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.17■■□□□ 1.14
Rnf223Q3UV31 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf223Q3UV31 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf223Q3UV31 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf223Q3UV31 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf223Q3UV31 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf223Q3UV31 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf223Q3UV31 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.15■■□□□ 1.14
Rnf223Q3UV31 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf223Q3UV31 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Rnf223Q3UV31 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.14■■□□□ 1.13
Rnf223Q3UV31 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf223Q3UV31 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf223Q3UV31 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf223Q3UV31 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Rnf223Q3UV31 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf223Q3UV31 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.13■■□□□ 1.13
Rnf223Q3UV31 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf223Q3UV31 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf223Q3UV31 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.12■■□□□ 1.13
Rnf223Q3UV31 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf223Q3UV31 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.12■■□□□ 1.13
Rnf223Q3UV31 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Rnf223Q3UV31 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf223Q3UV31 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Rnf223Q3UV31 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Rnf223Q3UV31 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf223Q3UV31 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf223Q3UV31 Gm44428-201ENSMUST00000204474 874 ntBASIC22.11■■□□□ 1.13
Rnf223Q3UV31 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms