Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.48■■□□□ 1.51
Smcr8Q3UMB5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Smcr8Q3UMB5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Smcr8Q3UMB5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Smcr8Q3UMB5 Terc-201ENSMUST00000082862 423 ntBASIC24.48■■□□□ 1.51
Smcr8Q3UMB5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Smcr8Q3UMB5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smcr8Q3UMB5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smcr8Q3UMB5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smcr8Q3UMB5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Smcr8Q3UMB5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Smcr8Q3UMB5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
Smcr8Q3UMB5 Gm14523-201ENSMUST00000117260 558 ntBASIC24.46■■□□□ 1.51
Smcr8Q3UMB5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Smcr8Q3UMB5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Smcr8Q3UMB5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Smcr8Q3UMB5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Smcr8Q3UMB5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.45■■□□□ 1.51
Smcr8Q3UMB5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Smcr8Q3UMB5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.45■■□□□ 1.5
Smcr8Q3UMB5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.45■■□□□ 1.5
Smcr8Q3UMB5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Smcr8Q3UMB5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Smcr8Q3UMB5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Smcr8Q3UMB5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Smcr8Q3UMB5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.43■■□□□ 1.5
Smcr8Q3UMB5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.43■■□□□ 1.5
Smcr8Q3UMB5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Smcr8Q3UMB5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Smcr8Q3UMB5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smcr8Q3UMB5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.42■■□□□ 1.5
Smcr8Q3UMB5 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.42■■□□□ 1.5
Smcr8Q3UMB5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Smcr8Q3UMB5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Smcr8Q3UMB5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Smcr8Q3UMB5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Smcr8Q3UMB5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smcr8Q3UMB5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smcr8Q3UMB5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Smcr8Q3UMB5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.4■■□□□ 1.5
Smcr8Q3UMB5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smcr8Q3UMB5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Smcr8Q3UMB5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.39■■□□□ 1.49
Smcr8Q3UMB5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smcr8Q3UMB5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smcr8Q3UMB5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smcr8Q3UMB5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Smcr8Q3UMB5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smcr8Q3UMB5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smcr8Q3UMB5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Smcr8Q3UMB5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smcr8Q3UMB5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smcr8Q3UMB5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Smcr8Q3UMB5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smcr8Q3UMB5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smcr8Q3UMB5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smcr8Q3UMB5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Smcr8Q3UMB5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smcr8Q3UMB5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Smcr8Q3UMB5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smcr8Q3UMB5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.36■■□□□ 1.49
Smcr8Q3UMB5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smcr8Q3UMB5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Smcr8Q3UMB5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smcr8Q3UMB5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
Smcr8Q3UMB5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smcr8Q3UMB5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.34■■□□□ 1.49
Smcr8Q3UMB5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.34■■□□□ 1.49
Smcr8Q3UMB5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Smcr8Q3UMB5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Smcr8Q3UMB5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Smcr8Q3UMB5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.33■■□□□ 1.49
Smcr8Q3UMB5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
Smcr8Q3UMB5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Smcr8Q3UMB5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Smcr8Q3UMB5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.31■■□□□ 1.48
Smcr8Q3UMB5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smcr8Q3UMB5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.31■■□□□ 1.48
Smcr8Q3UMB5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Smcr8Q3UMB5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smcr8Q3UMB5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smcr8Q3UMB5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Smcr8Q3UMB5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smcr8Q3UMB5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smcr8Q3UMB5 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.3■■□□□ 1.48
Smcr8Q3UMB5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smcr8Q3UMB5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Smcr8Q3UMB5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smcr8Q3UMB5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Smcr8Q3UMB5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Smcr8Q3UMB5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.29■■□□□ 1.48
Smcr8Q3UMB5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smcr8Q3UMB5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.28■■□□□ 1.48
Smcr8Q3UMB5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.28■■□□□ 1.48
Smcr8Q3UMB5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smcr8Q3UMB5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Smcr8Q3UMB5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Smcr8Q3UMB5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smcr8Q3UMB5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smcr8Q3UMB5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms