Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln6Q3U466 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln6Q3U466 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cln6Q3U466 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln6Q3U466 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln6Q3U466 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cln6Q3U466 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.23■□□□□ 0.67
Cln6Q3U466 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cln6Q3U466 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cln6Q3U466 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cln6Q3U466 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cln6Q3U466 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cln6Q3U466 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cln6Q3U466 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cln6Q3U466 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cln6Q3U466 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln6Q3U466 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln6Q3U466 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln6Q3U466 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cln6Q3U466 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.21■□□□□ 0.67
Cln6Q3U466 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Cln6Q3U466 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.2■□□□□ 0.66
Cln6Q3U466 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cln6Q3U466 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cln6Q3U466 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cln6Q3U466 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cln6Q3U466 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.18■□□□□ 0.66
Cln6Q3U466 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cln6Q3U466 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cln6Q3U466 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cln6Q3U466 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cln6Q3U466 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cln6Q3U466 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cln6Q3U466 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.17■□□□□ 0.66
Cln6Q3U466 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cln6Q3U466 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Cln6Q3U466 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cln6Q3U466 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cln6Q3U466 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cln6Q3U466 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cln6Q3U466 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cln6Q3U466 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
Cln6Q3U466 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cln6Q3U466 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln6Q3U466 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln6Q3U466 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cln6Q3U466 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.14■□□□□ 0.65
Cln6Q3U466 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cln6Q3U466 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cln6Q3U466 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cln6Q3U466 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.13■□□□□ 0.65
Cln6Q3U466 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cln6Q3U466 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cln6Q3U466 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cln6Q3U466 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cln6Q3U466 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cln6Q3U466 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cln6Q3U466 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cln6Q3U466 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cln6Q3U466 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cln6Q3U466 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cln6Q3U466 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cln6Q3U466 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cln6Q3U466 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cln6Q3U466 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cln6Q3U466 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cln6Q3U466 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cln6Q3U466 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cln6Q3U466 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cln6Q3U466 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cln6Q3U466 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cln6Q3U466 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cln6Q3U466 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cln6Q3U466 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cln6Q3U466 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cln6Q3U466 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cln6Q3U466 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cln6Q3U466 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cln6Q3U466 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cln6Q3U466 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cln6Q3U466 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cln6Q3U466 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cln6Q3U466 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cln6Q3U466 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cln6Q3U466 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cln6Q3U466 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cln6Q3U466 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cln6Q3U466 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cln6Q3U466 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cln6Q3U466 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cln6Q3U466 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cln6Q3U466 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Cln6Q3U466 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
Cln6Q3U466 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cln6Q3U466 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cln6Q3U466 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cln6Q3U466 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cln6Q3U466 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cln6Q3U466 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cln6Q3U466 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms