Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rnf149Q3U2C5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf149Q3U2C5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.3■□□□□ 0.84
Rnf149Q3U2C5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf149Q3U2C5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.3■□□□□ 0.84
Rnf149Q3U2C5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf149Q3U2C5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf149Q3U2C5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rnf149Q3U2C5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf149Q3U2C5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rnf149Q3U2C5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf149Q3U2C5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf149Q3U2C5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rnf149Q3U2C5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf149Q3U2C5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf149Q3U2C5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf149Q3U2C5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rnf149Q3U2C5 Nkain2-201ENSMUST00000092602 558 ntBASIC20.27■□□□□ 0.84
Rnf149Q3U2C5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rnf149Q3U2C5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf149Q3U2C5 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.26■□□□□ 0.83
Rnf149Q3U2C5 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.26■□□□□ 0.83
Rnf149Q3U2C5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf149Q3U2C5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rnf149Q3U2C5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf149Q3U2C5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf149Q3U2C5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rnf149Q3U2C5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf149Q3U2C5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rnf149Q3U2C5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.25■□□□□ 0.83
Rnf149Q3U2C5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf149Q3U2C5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf149Q3U2C5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.25■□□□□ 0.83
Rnf149Q3U2C5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rnf149Q3U2C5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf149Q3U2C5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf149Q3U2C5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Rnf149Q3U2C5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf149Q3U2C5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rnf149Q3U2C5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rnf149Q3U2C5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf149Q3U2C5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf149Q3U2C5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf149Q3U2C5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Rnf149Q3U2C5 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.22■□□□□ 0.83
Rnf149Q3U2C5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf149Q3U2C5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf149Q3U2C5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf149Q3U2C5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf149Q3U2C5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf149Q3U2C5 Particl-201ENSMUST00000205370 1560 ntBASIC20.21■□□□□ 0.83
Rnf149Q3U2C5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.21■□□□□ 0.83
Rnf149Q3U2C5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf149Q3U2C5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Rnf149Q3U2C5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf149Q3U2C5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf149Q3U2C5 Gm8503-201ENSMUST00000118131 455 ntBASIC20.2■□□□□ 0.82
Rnf149Q3U2C5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rnf149Q3U2C5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf149Q3U2C5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rnf149Q3U2C5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.19■□□□□ 0.82
Rnf149Q3U2C5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.19■□□□□ 0.82
Rnf149Q3U2C5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf149Q3U2C5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf149Q3U2C5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.18■□□□□ 0.82
Rnf149Q3U2C5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Rnf149Q3U2C5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf149Q3U2C5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf149Q3U2C5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf149Q3U2C5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf149Q3U2C5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf149Q3U2C5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf149Q3U2C5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf149Q3U2C5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rnf149Q3U2C5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf149Q3U2C5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf149Q3U2C5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf149Q3U2C5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rnf149Q3U2C5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf149Q3U2C5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rnf149Q3U2C5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf149Q3U2C5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Rnf149Q3U2C5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.15■□□□□ 0.82
Rnf149Q3U2C5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf149Q3U2C5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf149Q3U2C5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf149Q3U2C5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Rnf149Q3U2C5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
Rnf149Q3U2C5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf149Q3U2C5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf149Q3U2C5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf149Q3U2C5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.14■□□□□ 0.81
Rnf149Q3U2C5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf149Q3U2C5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf149Q3U2C5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Rnf149Q3U2C5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf149Q3U2C5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf149Q3U2C5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf149Q3U2C5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rnf149Q3U2C5 Gm30023-201ENSMUST00000197970 889 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms