Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Treml4Q3LRV9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Treml4Q3LRV9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Treml4Q3LRV9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Treml4Q3LRV9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Treml4Q3LRV9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Treml4Q3LRV9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Treml4Q3LRV9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Treml4Q3LRV9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Treml4Q3LRV9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Treml4Q3LRV9 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.39■■□□□ 1.01
Treml4Q3LRV9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Treml4Q3LRV9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Treml4Q3LRV9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Treml4Q3LRV9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Treml4Q3LRV9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Treml4Q3LRV9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.38■■□□□ 1.01
Treml4Q3LRV9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.38■■□□□ 1.01
Treml4Q3LRV9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Treml4Q3LRV9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Treml4Q3LRV9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Treml4Q3LRV9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Treml4Q3LRV9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Treml4Q3LRV9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.36■■□□□ 1.01
Treml4Q3LRV9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Treml4Q3LRV9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Treml4Q3LRV9 Gm15546-201ENSMUST00000122095 826 ntBASIC21.34■■□□□ 1.01
Treml4Q3LRV9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.34■■□□□ 1.01
Treml4Q3LRV9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Treml4Q3LRV9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Treml4Q3LRV9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Treml4Q3LRV9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Treml4Q3LRV9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.33■■□□□ 1.01
Treml4Q3LRV9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Treml4Q3LRV9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.33■■□□□ 1.01
Treml4Q3LRV9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Treml4Q3LRV9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.32■■□□□ 1
Treml4Q3LRV9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Treml4Q3LRV9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.31■■□□□ 1
Treml4Q3LRV9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Treml4Q3LRV9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Treml4Q3LRV9 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.3■■□□□ 1
Treml4Q3LRV9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.3■■□□□ 1
Treml4Q3LRV9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.3■■□□□ 1
Treml4Q3LRV9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Treml4Q3LRV9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.29■■□□□ 1
Treml4Q3LRV9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Treml4Q3LRV9 Terc-201ENSMUST00000082862 423 ntBASIC21.29■■□□□ 1
Treml4Q3LRV9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.29■■□□□ 1
Treml4Q3LRV9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.28■■□□□ 1
Treml4Q3LRV9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Treml4Q3LRV9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Treml4Q3LRV9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.27■■□□□ 1
Treml4Q3LRV9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Treml4Q3LRV9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Treml4Q3LRV9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Treml4Q3LRV9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Treml4Q3LRV9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.25■□□□□ 0.99
Treml4Q3LRV9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Treml4Q3LRV9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Treml4Q3LRV9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Treml4Q3LRV9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.25■□□□□ 0.99
Treml4Q3LRV9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Treml4Q3LRV9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Treml4Q3LRV9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Treml4Q3LRV9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Treml4Q3LRV9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.24■□□□□ 0.99
Treml4Q3LRV9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Treml4Q3LRV9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Treml4Q3LRV9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Treml4Q3LRV9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Treml4Q3LRV9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Treml4Q3LRV9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Treml4Q3LRV9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Treml4Q3LRV9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.23■□□□□ 0.99
Treml4Q3LRV9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Treml4Q3LRV9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Treml4Q3LRV9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Treml4Q3LRV9 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.22■□□□□ 0.99
Treml4Q3LRV9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Treml4Q3LRV9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Treml4Q3LRV9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Treml4Q3LRV9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Treml4Q3LRV9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Treml4Q3LRV9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Treml4Q3LRV9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.21■□□□□ 0.99
Treml4Q3LRV9 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.21■□□□□ 0.99
Treml4Q3LRV9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.21■□□□□ 0.99
Treml4Q3LRV9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Treml4Q3LRV9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Treml4Q3LRV9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Treml4Q3LRV9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Treml4Q3LRV9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Treml4Q3LRV9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Treml4Q3LRV9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Treml4Q3LRV9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Treml4Q3LRV9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Treml4Q3LRV9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Treml4Q3LRV9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Treml4Q3LRV9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 241.7 ms