Protein–RNA interactions for Protein: P61406

Smg6, Telomerase-binding protein EST1A, mousemouse

Known RBP Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg6P61406 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Smg6P61406 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC31.49■■■□□ 2.63
Smg6P61406 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Smg6P61406 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Smg6P61406 Il17rd-202ENSMUST00000223942 2186 ntBASIC31.48■■■□□ 2.63
Smg6P61406 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Smg6P61406 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
Smg6P61406 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Smg6P61406 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC31.46■■■□□ 2.63
Smg6P61406 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Smg6P61406 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Smg6P61406 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Smg6P61406 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Smg6P61406 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smg6P61406 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smg6P61406 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smg6P61406 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smg6P61406 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Smg6P61406 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
Smg6P61406 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC31.43■■■□□ 2.62
Smg6P61406 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.43■■■□□ 2.62
Smg6P61406 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC31.42■■■□□ 2.62
Smg6P61406 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Smg6P61406 Mir3960-201ENSMUST00000198213 73 ntBASIC31.42■■■□□ 2.62
Smg6P61406 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Smg6P61406 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Smg6P61406 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Smg6P61406 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Smg6P61406 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smg6P61406 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smg6P61406 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Smg6P61406 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smg6P61406 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Smg6P61406 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Smg6P61406 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Smg6P61406 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Smg6P61406 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Smg6P61406 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC31.39■■■□□ 2.62
Smg6P61406 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Smg6P61406 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Smg6P61406 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31.39■■■□□ 2.62
Smg6P61406 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Smg6P61406 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Smg6P61406 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Smg6P61406 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Smg6P61406 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Smg6P61406 Pkd1-207ENSMUST00000228550 1050 ntBASIC31.37■■■□□ 2.61
Smg6P61406 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Smg6P61406 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Smg6P61406 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Smg6P61406 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Smg6P61406 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Smg6P61406 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
Smg6P61406 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
Smg6P61406 Gm42699-201ENSMUST00000198104 1657 ntBASIC31.34■■■□□ 2.61
Smg6P61406 Gm4419-202ENSMUST00000226239 1431 ntBASIC31.34■■■□□ 2.61
Smg6P61406 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC31.34■■■□□ 2.61
Smg6P61406 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Smg6P61406 Gm4799-201ENSMUST00000095396 657 ntBASIC31.32■■■□□ 2.61
Smg6P61406 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Smg6P61406 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Smg6P61406 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
Smg6P61406 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Smg6P61406 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Smg6P61406 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Smg6P61406 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Smg6P61406 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC31.29■■■□□ 2.6
Smg6P61406 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC31.29■■■□□ 2.6
Smg6P61406 AC122317.2-201ENSMUST00000218708 1248 ntBASIC31.28■■■□□ 2.6
Smg6P61406 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Smg6P61406 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
Smg6P61406 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Smg6P61406 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Smg6P61406 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Smg6P61406 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC31.27■■■□□ 2.6
Smg6P61406 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.27■■■□□ 2.6
Smg6P61406 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Smg6P61406 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC31.27■■■□□ 2.6
Smg6P61406 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Smg6P61406 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Smg6P61406 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Smg6P61406 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Smg6P61406 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Smg6P61406 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Smg6P61406 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Smg6P61406 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Smg6P61406 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC31.25■■■□□ 2.59
Smg6P61406 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Smg6P61406 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Smg6P61406 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Smg6P61406 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.24■■■□□ 2.59
Smg6P61406 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Smg6P61406 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Smg6P61406 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Smg6P61406 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Smg6P61406 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Smg6P61406 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Smg6P61406 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC31.22■■■□□ 2.59
Smg6P61406 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Smg6P61406 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC31.21■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms