Protein–RNA interactions for Protein: P51676

Ccr1l1, C-C chemokine receptor 1-like protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1l1P51676 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ccr1l1P51676 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccr1l1P51676 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1l1P51676 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1l1P51676 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ccr1l1P51676 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ccr1l1P51676 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1l1P51676 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1l1P51676 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1l1P51676 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccr1l1P51676 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccr1l1P51676 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccr1l1P51676 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1l1P51676 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1l1P51676 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.49■□□□□ 0.87
Ccr1l1P51676 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
Ccr1l1P51676 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1l1P51676 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1l1P51676 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccr1l1P51676 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.48■□□□□ 0.87
Ccr1l1P51676 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr1l1P51676 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr1l1P51676 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr1l1P51676 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.48■□□□□ 0.87
Ccr1l1P51676 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr1l1P51676 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccr1l1P51676 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccr1l1P51676 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccr1l1P51676 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccr1l1P51676 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.47■□□□□ 0.87
Ccr1l1P51676 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1l1P51676 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccr1l1P51676 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Ccr1l1P51676 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ccr1l1P51676 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1l1P51676 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1l1P51676 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccr1l1P51676 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.44■□□□□ 0.86
Ccr1l1P51676 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.44■□□□□ 0.86
Ccr1l1P51676 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccr1l1P51676 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ccr1l1P51676 Terc-201ENSMUST00000082862 423 ntBASIC20.44■□□□□ 0.86
Ccr1l1P51676 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccr1l1P51676 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1l1P51676 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1l1P51676 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1l1P51676 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1l1P51676 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccr1l1P51676 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Ccr1l1P51676 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.42■□□□□ 0.86
Ccr1l1P51676 Scarna2-201ENSMUST00000157560 414 ntBASIC20.42■□□□□ 0.86
Ccr1l1P51676 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr1l1P51676 Gm9806-201ENSMUST00000051080 552 ntBASIC20.41■□□□□ 0.86
Ccr1l1P51676 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr1l1P51676 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Ccr1l1P51676 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr1l1P51676 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr1l1P51676 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccr1l1P51676 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccr1l1P51676 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccr1l1P51676 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccr1l1P51676 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccr1l1P51676 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.39■□□□□ 0.85
Ccr1l1P51676 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccr1l1P51676 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccr1l1P51676 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccr1l1P51676 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccr1l1P51676 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1l1P51676 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1l1P51676 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Ccr1l1P51676 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccr1l1P51676 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.38■□□□□ 0.85
Ccr1l1P51676 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1l1P51676 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1l1P51676 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1l1P51676 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1l1P51676 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ccr1l1P51676 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccr1l1P51676 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccr1l1P51676 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccr1l1P51676 Gm11687-201ENSMUST00000118911 886 ntBASIC20.37■□□□□ 0.85
Ccr1l1P51676 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr1l1P51676 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr1l1P51676 Gm16437-201ENSMUST00000025669 507 ntBASIC20.36■□□□□ 0.85
Ccr1l1P51676 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccr1l1P51676 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccr1l1P51676 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccr1l1P51676 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccr1l1P51676 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccr1l1P51676 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccr1l1P51676 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr1l1P51676 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Ccr1l1P51676 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ccr1l1P51676 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr1l1P51676 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr1l1P51676 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr1l1P51676 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr1l1P51676 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr1l1P51676 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccr1l1P51676 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms