Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TgfaP48030 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.03■□□□□ 0.8
TgfaP48030 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TgfaP48030 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TgfaP48030 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TgfaP48030 Rps24-207ENSMUST00000224568 714 ntBASIC20.02■□□□□ 0.8
TgfaP48030 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.02■□□□□ 0.8
TgfaP48030 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.02■□□□□ 0.8
TgfaP48030 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.02■□□□□ 0.8
TgfaP48030 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TgfaP48030 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TgfaP48030 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TgfaP48030 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TgfaP48030 Zxda-201ENSMUST00000117281 2621 ntBASIC20.01■□□□□ 0.79
TgfaP48030 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TgfaP48030 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TgfaP48030 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TgfaP48030 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
TgfaP48030 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TgfaP48030 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TgfaP48030 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TgfaP48030 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TgfaP48030 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TgfaP48030 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TgfaP48030 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.97■□□□□ 0.79
TgfaP48030 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TgfaP48030 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.97■□□□□ 0.79
TgfaP48030 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.97■□□□□ 0.79
TgfaP48030 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.97■□□□□ 0.79
TgfaP48030 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TgfaP48030 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
TgfaP48030 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TgfaP48030 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TgfaP48030 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TgfaP48030 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TgfaP48030 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TgfaP48030 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TgfaP48030 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TgfaP48030 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TgfaP48030 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TgfaP48030 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TgfaP48030 Gm43566-201ENSMUST00000196851 808 ntBASIC19.94■□□□□ 0.78
TgfaP48030 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TgfaP48030 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.93■□□□□ 0.78
TgfaP48030 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TgfaP48030 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TgfaP48030 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
TgfaP48030 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TgfaP48030 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TgfaP48030 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TgfaP48030 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TgfaP48030 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TgfaP48030 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.91■□□□□ 0.78
TgfaP48030 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TgfaP48030 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TgfaP48030 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TgfaP48030 Gm13238-201ENSMUST00000117655 780 ntBASIC19.9■□□□□ 0.78
TgfaP48030 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TgfaP48030 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TgfaP48030 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TgfaP48030 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TgfaP48030 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.89■□□□□ 0.77
TgfaP48030 Gm45444-201ENSMUST00000211394 898 ntBASIC19.89■□□□□ 0.77
TgfaP48030 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.89■□□□□ 0.77
TgfaP48030 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.89■□□□□ 0.77
TgfaP48030 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TgfaP48030 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TgfaP48030 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TgfaP48030 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
TgfaP48030 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TgfaP48030 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TgfaP48030 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
TgfaP48030 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.86■□□□□ 0.77
TgfaP48030 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.86■□□□□ 0.77
TgfaP48030 Gm45102-201ENSMUST00000207427 857 ntBASIC19.86■□□□□ 0.77
TgfaP48030 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TgfaP48030 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TgfaP48030 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TgfaP48030 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TgfaP48030 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.85■□□□□ 0.77
TgfaP48030 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.85■□□□□ 0.77
TgfaP48030 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.85■□□□□ 0.77
TgfaP48030 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TgfaP48030 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.85■□□□□ 0.77
TgfaP48030 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TgfaP48030 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
TgfaP48030 Gm14117-201ENSMUST00000122417 843 ntBASIC19.84■□□□□ 0.77
TgfaP48030 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TgfaP48030 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TgfaP48030 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TgfaP48030 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TgfaP48030 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TgfaP48030 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
TgfaP48030 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TgfaP48030 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.82■□□□□ 0.76
TgfaP48030 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.82■□□□□ 0.76
TgfaP48030 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TgfaP48030 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.82■□□□□ 0.76
TgfaP48030 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TgfaP48030 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms