Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx2-6P43688 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx2-6P43688 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx2-6P43688 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Nkx2-6P43688 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx2-6P43688 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx2-6P43688 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-6P43688 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-6P43688 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-6P43688 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-6P43688 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-6P43688 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-6P43688 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-6P43688 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Nkx2-6P43688 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.58■■□□□ 1.05
Nkx2-6P43688 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nkx2-6P43688 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-6P43688 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Nkx2-6P43688 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Nkx2-6P43688 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-6P43688 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-6P43688 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-6P43688 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-6P43688 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-6P43688 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-6P43688 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.56■■□□□ 1.04
Nkx2-6P43688 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.56■■□□□ 1.04
Nkx2-6P43688 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-6P43688 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-6P43688 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-6P43688 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx2-6P43688 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.55■■□□□ 1.04
Nkx2-6P43688 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Nkx2-6P43688 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Nkx2-6P43688 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Nkx2-6P43688 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.54■■□□□ 1.04
Nkx2-6P43688 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-6P43688 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-6P43688 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Nkx2-6P43688 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-6P43688 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-6P43688 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-6P43688 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-6P43688 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.52■■□□□ 1.04
Nkx2-6P43688 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-6P43688 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.51■■□□□ 1.03
Nkx2-6P43688 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-6P43688 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-6P43688 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.5■■□□□ 1.03
Nkx2-6P43688 Gm10420-201ENSMUST00000121713 882 ntBASIC21.5■■□□□ 1.03
Nkx2-6P43688 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.5■■□□□ 1.03
Nkx2-6P43688 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Nkx2-6P43688 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-6P43688 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.5■■□□□ 1.03
Nkx2-6P43688 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Nkx2-6P43688 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-6P43688 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-6P43688 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.49■■□□□ 1.03
Nkx2-6P43688 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nkx2-6P43688 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
Nkx2-6P43688 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-6P43688 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-6P43688 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-6P43688 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.46■■□□□ 1.03
Nkx2-6P43688 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-6P43688 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-6P43688 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-6P43688 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Nkx2-6P43688 Gm44428-201ENSMUST00000204474 874 ntBASIC21.45■■□□□ 1.02
Nkx2-6P43688 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nkx2-6P43688 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-6P43688 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-6P43688 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.44■■□□□ 1.02
Nkx2-6P43688 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-6P43688 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.44■■□□□ 1.02
Nkx2-6P43688 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.44■■□□□ 1.02
Nkx2-6P43688 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-6P43688 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-6P43688 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.43■■□□□ 1.02
Nkx2-6P43688 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-6P43688 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.43■■□□□ 1.02
Nkx2-6P43688 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-6P43688 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-6P43688 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Nkx2-6P43688 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Nkx2-6P43688 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-6P43688 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.42■■□□□ 1.02
Nkx2-6P43688 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Nkx2-6P43688 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-6P43688 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-6P43688 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nkx2-6P43688 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nkx2-6P43688 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.41■■□□□ 1.02
Nkx2-6P43688 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nkx2-6P43688 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
Nkx2-6P43688 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nkx2-6P43688 Gm5921-201ENSMUST00000075898 882 ntBASIC21.4■■□□□ 1.02
Nkx2-6P43688 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Nkx2-6P43688 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Nkx2-6P43688 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms