Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 PMP3YDR276C 168 nt6.41□□□□□ -1.38
CUP9P41817 SUF3tG(CCC)D 72 nt6.41□□□□□ -1.38
CUP9P41817 SUN4YNL066W 1263 nt6.41□□□□□ -1.38
CUP9P41817 FIT2YOR382W 462 nt6.41□□□□□ -1.38
CUP9P41817 AFG3YER017C 2286 nt6.4□□□□□ -1.38
CUP9P41817 YDR327WYDR327W 327 nt6.4□□□□□ -1.38
CUP9P41817 YDR510C-AYDR510C-A 117 nt6.4□□□□□ -1.38
CUP9P41817 YLR030WYLR030W 792 nt6.4□□□□□ -1.38
CUP9P41817 YBL113CYBL113C 2379 nt6.4□□□□□ -1.39
CUP9P41817 LAS17YOR181W 1902 nt6.4□□□□□ -1.39
CUP9P41817 APE4YHR113W 1473 nt6.4□□□□□ -1.39
CUP9P41817 TOP3YLR234W 1971 nt6.39□□□□□ -1.39
CUP9P41817 GPD1YDL022W 1176 nt6.39□□□□□ -1.39
CUP9P41817 TPI1YDR050C 747 nt6.39□□□□□ -1.39
CUP9P41817 NDE1YMR145C 1683 nt6.39□□□□□ -1.39
CUP9P41817 PPH21YDL134C 1110 nt6.38□□□□□ -1.39
CUP9P41817 SPE4YLR146C 903 nt6.38□□□□□ -1.39
CUP9P41817 SSC1YJR045C 1965 nt6.37□□□□□ -1.39
CUP9P41817 FRT1YOR324C 1809 nt6.37□□□□□ -1.39
CUP9P41817 YNR005CYNR005C 405 nt6.37□□□□□ -1.39
CUP9P41817 CHA1YCL064C 1083 nt6.36□□□□□ -1.39
CUP9P41817 AIM20YIL158W 615 nt6.36□□□□□ -1.39
CUP9P41817 YMR074CYMR074C 438 nt6.36□□□□□ -1.39
CUP9P41817 TCB1YOR086C 3561 nt6.36□□□□□ -1.39
CUP9P41817 BRN1YBL097W 2265 nt6.36□□□□□ -1.39
CUP9P41817 GAL83YER027C 1254 nt6.35□□□□□ -1.39
CUP9P41817 AGX1YFL030W 1158 nt6.35□□□□□ -1.39
CUP9P41817 SPG1YGR236C 288 nt6.35□□□□□ -1.39
CUP9P41817 ASR1YPR093C 867 nt6.35□□□□□ -1.39
CUP9P41817 HNM1YGL077C 1692 nt6.35□□□□□ -1.39
CUP9P41817 GGC1YDL198C 903 nt6.34□□□□□ -1.39
CUP9P41817 DMC1YER179W 1005 nt6.34□□□□□ -1.39
CUP9P41817 GNA1YFL017C 480 nt6.34□□□□□ -1.39
CUP9P41817 RPL43AYPR043W 279 nt6.34□□□□□ -1.39
CUP9P41817 CTF3YLR381W 2202 nt6.33□□□□□ -1.4
CUP9P41817 OPI7YDR360W 435 nt6.33□□□□□ -1.4
CUP9P41817 YPL136WYPL136W 369 nt6.33□□□□□ -1.4
CUP9P41817 MAL31YBR298C 1845 nt6.33□□□□□ -1.4
CUP9P41817 RDR1YOR380W 1641 nt6.32□□□□□ -1.4
CUP9P41817 MRPL35YDR322W 1104 nt6.32□□□□□ -1.4
CUP9P41817 YGL260WYGL260W 231 nt6.32□□□□□ -1.4
CUP9P41817 YOR041CYOR041C 432 nt6.32□□□□□ -1.4
CUP9P41817 YKR018CYKR018C 2178 nt6.31□□□□□ -1.4
CUP9P41817 FMP40YPL222W 2067 nt6.31□□□□□ -1.4
CUP9P41817 YOL099CYOL099C 492 nt6.31□□□□□ -1.4
CUP9P41817 YIL029W-AYIL029W-A 372 nt6.3□□□□□ -1.4
CUP9P41817 YKL147CYKL147C 618 nt6.3□□□□□ -1.4
CUP9P41817 YLR184WYLR184W 348 nt6.3□□□□□ -1.4
CUP9P41817 NTG2YOL043C 1143 nt6.3□□□□□ -1.4
CUP9P41817 MHP1YJL042W 4197 nt6.3□□□□□ -1.4
CUP9P41817 CDC23YHR166C 1881 nt6.3□□□□□ -1.4
CUP9P41817 CDC7YDL017W 1524 nt6.3□□□□□ -1.4
CUP9P41817 PMA2YPL036W 2844 nt6.29□□□□□ -1.4
CUP9P41817 ERG27YLR100W 1044 nt6.29□□□□□ -1.4
CUP9P41817 ATP10YLR393W 840 nt6.29□□□□□ -1.4
CUP9P41817 SCS22YBL091C-A 528 nt6.29□□□□□ -1.4
CUP9P41817 YKL153WYKL153W 510 nt6.28□□□□□ -1.4
CUP9P41817 ERR1YOR393W 1314 nt6.27□□□□□ -1.41
CUP9P41817 ERR2YPL281C 1314 nt6.27□□□□□ -1.41
CUP9P41817 PGI1YBR196C 1665 nt6.27□□□□□ -1.41
CUP9P41817 YEL023CYEL023C 2049 nt6.27□□□□□ -1.41
CUP9P41817 LCL3YGL085W 825 nt6.27□□□□□ -1.41
CUP9P41817 GTS1YGL181W 1191 nt6.27□□□□□ -1.41
CUP9P41817 YMR253CYMR253C 1245 nt6.27□□□□□ -1.41
CUP9P41817 MSS51YLR203C 1311 nt6.26□□□□□ -1.41
CUP9P41817 SEC24YIL109C 2781 nt6.26□□□□□ -1.41
CUP9P41817 IMG1YCR046C 510 nt6.26□□□□□ -1.41
CUP9P41817 ASF1YJL115W 840 nt6.26□□□□□ -1.41
CUP9P41817 NUP49YGL172W 1419 nt6.25□□□□□ -1.41
CUP9P41817 FLC2YAL053W 2352 nt6.25□□□□□ -1.41
CUP9P41817 CRH1YGR189C 1524 nt6.25□□□□□ -1.41
CUP9P41817 PAB1YER165W 1734 nt6.25□□□□□ -1.41
CUP9P41817 CCR4YAL021C 2514 nt6.25□□□□□ -1.41
CUP9P41817 RPL2BYIL018W 765 nt6.25□□□□□ -1.41
CUP9P41817 MRPS18YNL306W 654 nt6.25□□□□□ -1.41
CUP9P41817 LIP5YOR196C 1245 nt6.25□□□□□ -1.41
CUP9P41817 RMD8YFR048W 1989 nt6.24□□□□□ -1.41
CUP9P41817 FMO1YHR176W 1299 nt6.24□□□□□ -1.41
CUP9P41817 YAL045CYAL045C 309 nt6.24□□□□□ -1.41
CUP9P41817 TAF9YMR236W 474 nt6.24□□□□□ -1.41
CUP9P41817 MRPL19YNL185C 477 nt6.24□□□□□ -1.41
CUP9P41817 PRB1YEL060C 1908 nt6.24□□□□□ -1.41
CUP9P41817 YCR049CYCR049C 447 nt6.23□□□□□ -1.41
CUP9P41817 YLL056CYLL056C 897 nt6.23□□□□□ -1.41
CUP9P41817 SAL1YNL083W 1485 nt6.22□□□□□ -1.41
CUP9P41817 ILV6YCL009C 930 nt6.22□□□□□ -1.41
CUP9P41817 YLL058WYLL058W 1728 nt6.22□□□□□ -1.41
CUP9P41817 YER137CYER137C 447 nt6.21□□□□□ -1.42
CUP9P41817 YGL102CYGL102C 429 nt6.21□□□□□ -1.42
CUP9P41817 YIP4YGL198W 708 nt6.21□□□□□ -1.42
CUP9P41817 GUT1YHL032C 2130 nt6.21□□□□□ -1.42
CUP9P41817 MDH1YKL085W 1005 nt6.21□□□□□ -1.42
CUP9P41817 LSC1YOR142W 990 nt6.21□□□□□ -1.42
CUP9P41817 TOD6YBL054W 1578 nt6.21□□□□□ -1.42
CUP9P41817 POB3YML069W 1659 nt6.2□□□□□ -1.42
CUP9P41817 RBS1YDL189W 1374 nt6.2□□□□□ -1.42
CUP9P41817 YIL108WYIL108W 2091 nt6.2□□□□□ -1.42
CUP9P41817 AQR1YNL065W 1761 nt6.2□□□□□ -1.42
CUP9P41817 ICP55YER078C 1536 nt6.2□□□□□ -1.42
CUP9P41817 CAN1YEL063C 1773 nt6.19□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 133.1 ms