Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.77■□□□□ 0.6
Abca1P41233 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.76■□□□□ 0.59
Abca1P41233 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abca1P41233 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Abca1P41233 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abca1P41233 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abca1P41233 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abca1P41233 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Abca1P41233 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.75■□□□□ 0.59
Abca1P41233 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Abca1P41233 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abca1P41233 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.75■□□□□ 0.59
Abca1P41233 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Abca1P41233 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abca1P41233 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abca1P41233 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.74■□□□□ 0.59
Abca1P41233 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.73■□□□□ 0.59
Abca1P41233 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.73■□□□□ 0.59
Abca1P41233 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abca1P41233 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abca1P41233 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.72■□□□□ 0.59
Abca1P41233 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.72■□□□□ 0.59
Abca1P41233 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Abca1P41233 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Abca1P41233 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Abca1P41233 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Abca1P41233 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abca1P41233 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Abca1P41233 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Abca1P41233 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abca1P41233 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Abca1P41233 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Abca1P41233 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.7■□□□□ 0.58
Abca1P41233 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abca1P41233 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abca1P41233 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abca1P41233 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abca1P41233 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Abca1P41233 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Abca1P41233 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abca1P41233 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abca1P41233 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Abca1P41233 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.69■□□□□ 0.58
Abca1P41233 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Abca1P41233 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abca1P41233 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abca1P41233 Terc-201ENSMUST00000082862 423 ntBASIC18.67■□□□□ 0.58
Abca1P41233 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Abca1P41233 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.67■□□□□ 0.58
Abca1P41233 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abca1P41233 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.66■□□□□ 0.58
Abca1P41233 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abca1P41233 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Abca1P41233 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.66■□□□□ 0.58
Abca1P41233 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abca1P41233 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Abca1P41233 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.65■□□□□ 0.58
Abca1P41233 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Abca1P41233 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Abca1P41233 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Abca1P41233 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Abca1P41233 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abca1P41233 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Abca1P41233 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abca1P41233 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abca1P41233 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Abca1P41233 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.63■□□□□ 0.57
Abca1P41233 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Abca1P41233 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca1P41233 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca1P41233 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Abca1P41233 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca1P41233 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca1P41233 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.62■□□□□ 0.57
Abca1P41233 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca1P41233 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.62■□□□□ 0.57
Abca1P41233 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abca1P41233 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Abca1P41233 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abca1P41233 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Abca1P41233 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.61■□□□□ 0.57
Abca1P41233 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abca1P41233 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abca1P41233 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Abca1P41233 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Abca1P41233 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Abca1P41233 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Abca1P41233 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.6■□□□□ 0.57
Abca1P41233 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.6■□□□□ 0.57
Abca1P41233 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abca1P41233 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abca1P41233 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.59■□□□□ 0.57
Abca1P41233 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Abca1P41233 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abca1P41233 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Abca1P41233 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abca1P41233 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abca1P41233 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abca1P41233 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Abca1P41233 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms