Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkn1aP39689 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1aP39689 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1aP39689 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn1aP39689 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1aP39689 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1aP39689 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.81■□□□□ 0.6
Cdkn1aP39689 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1aP39689 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn1aP39689 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.8■□□□□ 0.6
Cdkn1aP39689 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1aP39689 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn1aP39689 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn1aP39689 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdkn1aP39689 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdkn1aP39689 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1aP39689 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.78■□□□□ 0.6
Cdkn1aP39689 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1aP39689 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn1aP39689 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdkn1aP39689 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn1aP39689 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdkn1aP39689 Gm14523-201ENSMUST00000117260 558 ntBASIC18.77■□□□□ 0.6
Cdkn1aP39689 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.77■□□□□ 0.6
Cdkn1aP39689 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn1aP39689 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdkn1aP39689 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdkn1aP39689 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn1aP39689 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn1aP39689 Gm7332-201ENSMUST00000118351 454 ntBASIC18.76■□□□□ 0.59
Cdkn1aP39689 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn1aP39689 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn1aP39689 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdkn1aP39689 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkn1aP39689 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkn1aP39689 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.75■□□□□ 0.59
Cdkn1aP39689 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cdkn1aP39689 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkn1aP39689 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkn1aP39689 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkn1aP39689 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkn1aP39689 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkn1aP39689 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkn1aP39689 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Cdkn1aP39689 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkn1aP39689 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Cdkn1aP39689 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.71■□□□□ 0.59
Cdkn1aP39689 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn1aP39689 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn1aP39689 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cdkn1aP39689 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Cdkn1aP39689 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdkn1aP39689 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkn1aP39689 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.69■□□□□ 0.58
Cdkn1aP39689 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.68■□□□□ 0.58
Cdkn1aP39689 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn1aP39689 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.67■□□□□ 0.58
Cdkn1aP39689 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkn1aP39689 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Cdkn1aP39689 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkn1aP39689 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdkn1aP39689 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.66■□□□□ 0.58
Cdkn1aP39689 Gm44428-201ENSMUST00000204474 874 ntBASIC18.66■□□□□ 0.58
Cdkn1aP39689 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkn1aP39689 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkn1aP39689 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Cdkn1aP39689 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkn1aP39689 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cdkn1aP39689 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkn1aP39689 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkn1aP39689 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdkn1aP39689 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkn1aP39689 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkn1aP39689 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkn1aP39689 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms