Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RetP35546 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
RetP35546 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RetP35546 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RetP35546 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.21■□□□□ 0.99
RetP35546 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RetP35546 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RetP35546 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
RetP35546 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RetP35546 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RetP35546 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RetP35546 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RetP35546 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.19■□□□□ 0.98
RetP35546 Gm16437-201ENSMUST00000025669 507 ntBASIC21.19■□□□□ 0.98
RetP35546 Gm4799-201ENSMUST00000095396 657 ntBASIC21.19■□□□□ 0.98
RetP35546 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
RetP35546 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RetP35546 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RetP35546 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RetP35546 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RetP35546 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.18■□□□□ 0.98
RetP35546 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RetP35546 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RetP35546 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RetP35546 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RetP35546 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.16■□□□□ 0.98
RetP35546 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RetP35546 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RetP35546 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RetP35546 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RetP35546 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RetP35546 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RetP35546 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.14■□□□□ 0.97
RetP35546 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.13■□□□□ 0.97
RetP35546 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RetP35546 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RetP35546 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RetP35546 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RetP35546 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RetP35546 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RetP35546 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RetP35546 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.12■□□□□ 0.97
RetP35546 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.11■□□□□ 0.97
RetP35546 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RetP35546 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RetP35546 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RetP35546 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RetP35546 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RetP35546 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RetP35546 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RetP35546 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RetP35546 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.1■□□□□ 0.97
RetP35546 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.1■□□□□ 0.97
RetP35546 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RetP35546 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
RetP35546 Gm7332-201ENSMUST00000118351 454 ntBASIC21.09■□□□□ 0.97
RetP35546 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RetP35546 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RetP35546 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RetP35546 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RetP35546 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RetP35546 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RetP35546 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RetP35546 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RetP35546 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RetP35546 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RetP35546 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.07■□□□□ 0.96
RetP35546 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.07■□□□□ 0.96
RetP35546 Mir3960-201ENSMUST00000198213 73 ntBASIC21.07■□□□□ 0.96
RetP35546 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RetP35546 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.07■□□□□ 0.96
RetP35546 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RetP35546 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.06■□□□□ 0.96
RetP35546 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RetP35546 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RetP35546 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RetP35546 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RetP35546 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RetP35546 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RetP35546 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RetP35546 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RetP35546 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RetP35546 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RetP35546 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RetP35546 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RetP35546 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RetP35546 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RetP35546 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RetP35546 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RetP35546 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RetP35546 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RetP35546 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RetP35546 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RetP35546 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RetP35546 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RetP35546 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RetP35546 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RetP35546 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21■□□□□ 0.95
RetP35546 Gm27502-201ENSMUST00000183495 199 ntBASIC21■□□□□ 0.95
RetP35546 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms