Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a1P31648 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.51■□□□□ 0.71
Slc6a1P31648 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
Slc6a1P31648 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a1P31648 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a1P31648 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a1P31648 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a1P31648 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a1P31648 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a1P31648 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a1P31648 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Slc6a1P31648 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.49■□□□□ 0.71
Slc6a1P31648 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a1P31648 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Slc6a1P31648 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a1P31648 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a1P31648 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a1P31648 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a1P31648 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc6a1P31648 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.46■□□□□ 0.71
Slc6a1P31648 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Slc6a1P31648 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a1P31648 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a1P31648 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Slc6a1P31648 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Slc6a1P31648 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Slc6a1P31648 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slc6a1P31648 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.44■□□□□ 0.7
Slc6a1P31648 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a1P31648 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a1P31648 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Slc6a1P31648 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a1P31648 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a1P31648 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a1P31648 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Slc6a1P31648 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a1P31648 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a1P31648 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a1P31648 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Slc6a1P31648 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a1P31648 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Slc6a1P31648 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Slc6a1P31648 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.41■□□□□ 0.7
Slc6a1P31648 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a1P31648 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a1P31648 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.41■□□□□ 0.7
Slc6a1P31648 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.4■□□□□ 0.7
Slc6a1P31648 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a1P31648 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a1P31648 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a1P31648 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.39■□□□□ 0.69
Slc6a1P31648 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a1P31648 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.39■□□□□ 0.69
Slc6a1P31648 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a1P31648 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a1P31648 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a1P31648 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a1P31648 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a1P31648 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a1P31648 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Slc6a1P31648 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Slc6a1P31648 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.37■□□□□ 0.69
Slc6a1P31648 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a1P31648 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a1P31648 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a1P31648 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a1P31648 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a1P31648 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a1P31648 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a1P31648 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a1P31648 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a1P31648 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a1P31648 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms