Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CcnkO88874 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CcnkO88874 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20■□□□□ 0.79
CcnkO88874 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CcnkO88874 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CcnkO88874 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20■□□□□ 0.79
CcnkO88874 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CcnkO88874 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CcnkO88874 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CcnkO88874 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CcnkO88874 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CcnkO88874 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CcnkO88874 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CcnkO88874 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CcnkO88874 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CcnkO88874 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CcnkO88874 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.97■□□□□ 0.79
CcnkO88874 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.97■□□□□ 0.79
CcnkO88874 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CcnkO88874 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CcnkO88874 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CcnkO88874 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CcnkO88874 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.96■□□□□ 0.79
CcnkO88874 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CcnkO88874 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CcnkO88874 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CcnkO88874 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CcnkO88874 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CcnkO88874 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CcnkO88874 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CcnkO88874 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CcnkO88874 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.95■□□□□ 0.78
CcnkO88874 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.94■□□□□ 0.78
CcnkO88874 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CcnkO88874 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CcnkO88874 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CcnkO88874 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.93■□□□□ 0.78
CcnkO88874 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CcnkO88874 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CcnkO88874 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.93■□□□□ 0.78
CcnkO88874 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CcnkO88874 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CcnkO88874 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
CcnkO88874 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.92■□□□□ 0.78
CcnkO88874 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CcnkO88874 Nkain2-201ENSMUST00000092602 558 ntBASIC19.92■□□□□ 0.78
CcnkO88874 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CcnkO88874 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CcnkO88874 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CcnkO88874 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CcnkO88874 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CcnkO88874 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.91■□□□□ 0.78
CcnkO88874 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CcnkO88874 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CcnkO88874 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CcnkO88874 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
CcnkO88874 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CcnkO88874 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CcnkO88874 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CcnkO88874 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CcnkO88874 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CcnkO88874 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CcnkO88874 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CcnkO88874 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CcnkO88874 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CcnkO88874 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CcnkO88874 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CcnkO88874 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.88■□□□□ 0.77
CcnkO88874 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CcnkO88874 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CcnkO88874 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CcnkO88874 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CcnkO88874 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CcnkO88874 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CcnkO88874 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CcnkO88874 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CcnkO88874 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CcnkO88874 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CcnkO88874 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CcnkO88874 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.85■□□□□ 0.77
CcnkO88874 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CcnkO88874 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CcnkO88874 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CcnkO88874 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CcnkO88874 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CcnkO88874 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CcnkO88874 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CcnkO88874 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CcnkO88874 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CcnkO88874 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.82■□□□□ 0.76
CcnkO88874 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.82■□□□□ 0.76
CcnkO88874 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CcnkO88874 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CcnkO88874 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CcnkO88874 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.81■□□□□ 0.76
CcnkO88874 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CcnkO88874 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.81■□□□□ 0.76
CcnkO88874 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CcnkO88874 Notumos-201ENSMUST00000151998 2659 ntBASIC19.81■□□□□ 0.76
CcnkO88874 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms