Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Psmc3O88685 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.11■■□□□ 1.45
Psmc3O88685 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.1■■□□□ 1.45
Psmc3O88685 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Psmc3O88685 Gm5921-201ENSMUST00000075898 882 ntBASIC24.1■■□□□ 1.45
Psmc3O88685 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.1■■□□□ 1.45
Psmc3O88685 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.1■■□□□ 1.45
Psmc3O88685 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Psmc3O88685 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Psmc3O88685 Gm5812-201ENSMUST00000061073 957 ntBASIC24.09■■□□□ 1.45
Psmc3O88685 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Psmc3O88685 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Psmc3O88685 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Psmc3O88685 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Psmc3O88685 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Psmc3O88685 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Psmc3O88685 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Psmc3O88685 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Psmc3O88685 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Psmc3O88685 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Psmc3O88685 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Psmc3O88685 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Psmc3O88685 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Psmc3O88685 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Psmc3O88685 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Psmc3O88685 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Psmc3O88685 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Psmc3O88685 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Psmc3O88685 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Psmc3O88685 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Psmc3O88685 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Psmc3O88685 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.03■■□□□ 1.44
Psmc3O88685 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Psmc3O88685 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Psmc3O88685 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Psmc3O88685 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Psmc3O88685 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Psmc3O88685 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.01■■□□□ 1.43
Psmc3O88685 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Psmc3O88685 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24■■□□□ 1.43
Psmc3O88685 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Psmc3O88685 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24■■□□□ 1.43
Psmc3O88685 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Psmc3O88685 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Psmc3O88685 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Psmc3O88685 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Psmc3O88685 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Psmc3O88685 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.98■■□□□ 1.43
Psmc3O88685 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.98■■□□□ 1.43
Psmc3O88685 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Psmc3O88685 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Psmc3O88685 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.98■■□□□ 1.43
Psmc3O88685 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Psmc3O88685 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Psmc3O88685 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.97■■□□□ 1.43
Psmc3O88685 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.97■■□□□ 1.43
Psmc3O88685 Gm44428-201ENSMUST00000204474 874 ntBASIC23.97■■□□□ 1.43
Psmc3O88685 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Psmc3O88685 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Psmc3O88685 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
Psmc3O88685 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Psmc3O88685 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.95■■□□□ 1.42
Psmc3O88685 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Psmc3O88685 Gm22567-201ENSMUST00000175542 342 ntBASIC23.94■■□□□ 1.42
Psmc3O88685 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Psmc3O88685 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Psmc3O88685 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Psmc3O88685 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Psmc3O88685 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Psmc3O88685 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Psmc3O88685 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Psmc3O88685 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.92■■□□□ 1.42
Psmc3O88685 Gm15546-201ENSMUST00000122095 826 ntBASIC23.92■■□□□ 1.42
Psmc3O88685 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Psmc3O88685 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.92■■□□□ 1.42
Psmc3O88685 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Psmc3O88685 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Psmc3O88685 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Psmc3O88685 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.91■■□□□ 1.42
Psmc3O88685 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Psmc3O88685 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Psmc3O88685 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Psmc3O88685 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
Psmc3O88685 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Psmc3O88685 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Psmc3O88685 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Psmc3O88685 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Psmc3O88685 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Psmc3O88685 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Psmc3O88685 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Psmc3O88685 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Psmc3O88685 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
Psmc3O88685 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Psmc3O88685 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Psmc3O88685 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
Psmc3O88685 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.85■■□□□ 1.41
Psmc3O88685 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.85■■□□□ 1.41
Psmc3O88685 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Psmc3O88685 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Psmc3O88685 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms