Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DffbO54788 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DffbO54788 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DffbO54788 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DffbO54788 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DffbO54788 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.41■□□□□ 0.7
DffbO54788 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DffbO54788 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffbO54788 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffbO54788 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffbO54788 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffbO54788 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DffbO54788 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DffbO54788 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DffbO54788 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DffbO54788 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
DffbO54788 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
DffbO54788 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DffbO54788 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DffbO54788 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.38■□□□□ 0.69
DffbO54788 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
DffbO54788 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DffbO54788 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
DffbO54788 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DffbO54788 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffbO54788 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DffbO54788 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DffbO54788 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DffbO54788 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DffbO54788 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
DffbO54788 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DffbO54788 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
DffbO54788 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DffbO54788 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DffbO54788 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
DffbO54788 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DffbO54788 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
DffbO54788 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.34■□□□□ 0.69
DffbO54788 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DffbO54788 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DffbO54788 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DffbO54788 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
DffbO54788 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DffbO54788 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DffbO54788 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
DffbO54788 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DffbO54788 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DffbO54788 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DffbO54788 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DffbO54788 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DffbO54788 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DffbO54788 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DffbO54788 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DffbO54788 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.3■□□□□ 0.68
DffbO54788 Nkain2-201ENSMUST00000092602 558 ntBASIC19.3■□□□□ 0.68
DffbO54788 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
DffbO54788 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DffbO54788 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
DffbO54788 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
DffbO54788 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
DffbO54788 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DffbO54788 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DffbO54788 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.29■□□□□ 0.68
DffbO54788 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DffbO54788 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DffbO54788 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DffbO54788 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DffbO54788 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.29■□□□□ 0.68
DffbO54788 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DffbO54788 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DffbO54788 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DffbO54788 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DffbO54788 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DffbO54788 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
DffbO54788 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DffbO54788 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DffbO54788 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
DffbO54788 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DffbO54788 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
DffbO54788 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
DffbO54788 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
DffbO54788 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DffbO54788 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DffbO54788 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
DffbO54788 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.25■□□□□ 0.67
DffbO54788 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DffbO54788 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.25■□□□□ 0.67
DffbO54788 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.25■□□□□ 0.67
DffbO54788 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DffbO54788 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
DffbO54788 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DffbO54788 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DffbO54788 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
DffbO54788 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.24■□□□□ 0.67
DffbO54788 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DffbO54788 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
DffbO54788 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
DffbO54788 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.23■□□□□ 0.67
DffbO54788 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DffbO54788 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms