Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Atf6bO35451 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Atf6bO35451 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.51■□□□□ 0.71
Atf6bO35451 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6bO35451 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Atf6bO35451 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6bO35451 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.5■□□□□ 0.71
Atf6bO35451 Gm45364-201ENSMUST00000210883 159 ntBASIC19.5■□□□□ 0.71
Atf6bO35451 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6bO35451 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6bO35451 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6bO35451 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6bO35451 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6bO35451 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Atf6bO35451 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6bO35451 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6bO35451 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6bO35451 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6bO35451 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6bO35451 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6bO35451 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.48■□□□□ 0.71
Atf6bO35451 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6bO35451 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6bO35451 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6bO35451 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6bO35451 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Atf6bO35451 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf6bO35451 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf6bO35451 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.47■□□□□ 0.71
Atf6bO35451 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.47■□□□□ 0.71
Atf6bO35451 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.47■□□□□ 0.71
Atf6bO35451 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf6bO35451 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6bO35451 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6bO35451 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6bO35451 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.46■□□□□ 0.71
Atf6bO35451 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6bO35451 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6bO35451 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6bO35451 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6bO35451 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.45■□□□□ 0.7
Atf6bO35451 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6bO35451 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Atf6bO35451 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6bO35451 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6bO35451 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6bO35451 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6bO35451 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Atf6bO35451 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.42■□□□□ 0.7
Atf6bO35451 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atf6bO35451 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Atf6bO35451 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf6bO35451 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf6bO35451 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf6bO35451 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Atf6bO35451 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf6bO35451 Gm9812-201ENSMUST00000061934 968 ntBASIC19.41■□□□□ 0.7
Atf6bO35451 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf6bO35451 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6bO35451 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.4■□□□□ 0.7
Atf6bO35451 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6bO35451 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6bO35451 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6bO35451 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6bO35451 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6bO35451 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6bO35451 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6bO35451 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6bO35451 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.39■□□□□ 0.69
Atf6bO35451 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Atf6bO35451 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6bO35451 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
Atf6bO35451 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf6bO35451 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf6bO35451 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Atf6bO35451 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atf6bO35451 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Atf6bO35451 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6bO35451 Gm11175-201ENSMUST00000116172 543 ntBASIC19.37■□□□□ 0.69
Atf6bO35451 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6bO35451 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atf6bO35451 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Atf6bO35451 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.36■□□□□ 0.69
Atf6bO35451 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atf6bO35451 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atf6bO35451 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6bO35451 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6bO35451 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.35■□□□□ 0.69
Atf6bO35451 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6bO35451 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.35■□□□□ 0.69
Atf6bO35451 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6bO35451 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atf6bO35451 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6bO35451 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6bO35451 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6bO35451 Scarna2-201ENSMUST00000157560 414 ntBASIC19.34■□□□□ 0.69
Atf6bO35451 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atf6bO35451 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Atf6bO35451 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atf6bO35451 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms