Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm10553J3QPF1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm10553J3QPF1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm10553J3QPF1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm10553J3QPF1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm10553J3QPF1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm10553J3QPF1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm10553J3QPF1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm10553J3QPF1 Gm11687-201ENSMUST00000118911 886 ntBASIC17.32■□□□□ 0.36
Gm10553J3QPF1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Gm10553J3QPF1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10553J3QPF1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10553J3QPF1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10553J3QPF1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10553J3QPF1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm10553J3QPF1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm10553J3QPF1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm10553J3QPF1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10553J3QPF1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10553J3QPF1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10553J3QPF1 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.3■□□□□ 0.36
Gm10553J3QPF1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm10553J3QPF1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gm10553J3QPF1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gm10553J3QPF1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm10553J3QPF1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm10553J3QPF1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm10553J3QPF1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm10553J3QPF1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm10553J3QPF1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm10553J3QPF1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm10553J3QPF1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm10553J3QPF1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.28■□□□□ 0.36
Gm10553J3QPF1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm10553J3QPF1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm10553J3QPF1 Mir6538-201ENSMUST00000183713 110 ntBASIC17.27■□□□□ 0.36
Gm10553J3QPF1 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.27■□□□□ 0.36
Gm10553J3QPF1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Gm10553J3QPF1 Terc-201ENSMUST00000082862 423 ntBASIC17.27■□□□□ 0.36
Gm10553J3QPF1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm10553J3QPF1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.27■□□□□ 0.35
Gm10553J3QPF1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Gm10553J3QPF1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm10553J3QPF1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10553J3QPF1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm10553J3QPF1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10553J3QPF1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10553J3QPF1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm10553J3QPF1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm10553J3QPF1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10553J3QPF1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10553J3QPF1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10553J3QPF1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gm10553J3QPF1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10553J3QPF1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm10553J3QPF1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.24■□□□□ 0.35
Gm10553J3QPF1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10553J3QPF1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10553J3QPF1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10553J3QPF1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10553J3QPF1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm10553J3QPF1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10553J3QPF1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10553J3QPF1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.23■□□□□ 0.35
Gm10553J3QPF1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm10553J3QPF1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm10553J3QPF1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10553J3QPF1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10553J3QPF1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10553J3QPF1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10553J3QPF1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10553J3QPF1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10553J3QPF1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm10553J3QPF1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10553J3QPF1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm10553J3QPF1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10553J3QPF1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10553J3QPF1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10553J3QPF1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10553J3QPF1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gm10553J3QPF1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm10553J3QPF1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gm10553J3QPF1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm10553J3QPF1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.2■□□□□ 0.34
Gm10553J3QPF1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm10553J3QPF1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Gm10553J3QPF1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm10553J3QPF1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm10553J3QPF1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10553J3QPF1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10553J3QPF1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm10553J3QPF1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Gm10553J3QPF1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm10553J3QPF1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.18■□□□□ 0.34
Gm10553J3QPF1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.18■□□□□ 0.34
Gm10553J3QPF1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Gm10553J3QPF1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm10553J3QPF1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Gm10553J3QPF1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Gm10553J3QPF1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms