Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Gcn1E9PVA8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.2■□□□□ 0.82
Gcn1E9PVA8 Gm18284-201ENSMUST00000172604 624 ntBASIC20.2■□□□□ 0.82
Gcn1E9PVA8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.2■□□□□ 0.82
Gcn1E9PVA8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.19■□□□□ 0.82
Gcn1E9PVA8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gcn1E9PVA8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.18■□□□□ 0.82
Gcn1E9PVA8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gcn1E9PVA8 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.18■□□□□ 0.82
Gcn1E9PVA8 Gm10232-201ENSMUST00000089221 720 ntBASIC20.18■□□□□ 0.82
Gcn1E9PVA8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
Gcn1E9PVA8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gcn1E9PVA8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gcn1E9PVA8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gcn1E9PVA8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gcn1E9PVA8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gcn1E9PVA8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gcn1E9PVA8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gcn1E9PVA8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gcn1E9PVA8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Gcn1E9PVA8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gcn1E9PVA8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gcn1E9PVA8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gcn1E9PVA8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gcn1E9PVA8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gcn1E9PVA8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.15■□□□□ 0.82
Gcn1E9PVA8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Gcn1E9PVA8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gcn1E9PVA8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gcn1E9PVA8 Gm27011-201ENSMUST00000182352 972 ntBASIC20.14■□□□□ 0.81
Gcn1E9PVA8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gcn1E9PVA8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gcn1E9PVA8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gcn1E9PVA8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.13■□□□□ 0.81
Gcn1E9PVA8 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.13■□□□□ 0.81
Gcn1E9PVA8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gcn1E9PVA8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gcn1E9PVA8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gcn1E9PVA8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.12■□□□□ 0.81
Gcn1E9PVA8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gcn1E9PVA8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gcn1E9PVA8 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.11■□□□□ 0.81
Gcn1E9PVA8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gcn1E9PVA8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gcn1E9PVA8 Gm27454-201ENSMUST00000185090 204 ntBASIC20.1■□□□□ 0.81
Gcn1E9PVA8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gcn1E9PVA8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.09■□□□□ 0.81
Gcn1E9PVA8 Gm9812-201ENSMUST00000061934 968 ntBASIC20.09■□□□□ 0.81
Gcn1E9PVA8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gcn1E9PVA8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gcn1E9PVA8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gcn1E9PVA8 Gm12821-201ENSMUST00000120022 600 ntBASIC20.08■□□□□ 0.81
Gcn1E9PVA8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
Gcn1E9PVA8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Gcn1E9PVA8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.08■□□□□ 0.8
Gcn1E9PVA8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Gcn1E9PVA8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Gcn1E9PVA8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Gcn1E9PVA8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gcn1E9PVA8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.07■□□□□ 0.8
Gcn1E9PVA8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Gcn1E9PVA8 Gm37136-201ENSMUST00000194368 194 ntBASIC20.07■□□□□ 0.8
Gcn1E9PVA8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gcn1E9PVA8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.06■□□□□ 0.8
Gcn1E9PVA8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Gcn1E9PVA8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gcn1E9PVA8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gcn1E9PVA8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gcn1E9PVA8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gcn1E9PVA8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gcn1E9PVA8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gcn1E9PVA8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gcn1E9PVA8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gcn1E9PVA8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gcn1E9PVA8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gcn1E9PVA8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.04■□□□□ 0.8
Gcn1E9PVA8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gcn1E9PVA8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gcn1E9PVA8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gcn1E9PVA8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gcn1E9PVA8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.01■□□□□ 0.79
Gcn1E9PVA8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gcn1E9PVA8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.01■□□□□ 0.79
Gcn1E9PVA8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gcn1E9PVA8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gcn1E9PVA8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gcn1E9PVA8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20■□□□□ 0.79
Gcn1E9PVA8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20■□□□□ 0.79
Gcn1E9PVA8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gcn1E9PVA8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Gcn1E9PVA8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gcn1E9PVA8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gcn1E9PVA8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gcn1E9PVA8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gcn1E9PVA8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gcn1E9PVA8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.99■□□□□ 0.79
Gcn1E9PVA8 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.99■□□□□ 0.79
Gcn1E9PVA8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Gcn1E9PVA8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gcn1E9PVA8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms