Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hist1h2aeC0HKE4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hist1h2aeC0HKE4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hist1h2aeC0HKE4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.66■□□□□ 0.9
Hist1h2aeC0HKE4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hist1h2aeC0HKE4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hist1h2aeC0HKE4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Hist1h2aeC0HKE4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hist1h2aeC0HKE4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Hist1h2aeC0HKE4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h2aeC0HKE4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h2aeC0HKE4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h2aeC0HKE4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h2aeC0HKE4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h2aeC0HKE4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hist1h2aeC0HKE4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.64■□□□□ 0.89
Hist1h2aeC0HKE4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hist1h2aeC0HKE4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hist1h2aeC0HKE4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hist1h2aeC0HKE4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Hist1h2aeC0HKE4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hist1h2aeC0HKE4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.62■□□□□ 0.89
Hist1h2aeC0HKE4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.62■□□□□ 0.89
Hist1h2aeC0HKE4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h2aeC0HKE4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hist1h2aeC0HKE4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.62■□□□□ 0.89
Hist1h2aeC0HKE4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.62■□□□□ 0.89
Hist1h2aeC0HKE4 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.61■□□□□ 0.89
Hist1h2aeC0HKE4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hist1h2aeC0HKE4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hist1h2aeC0HKE4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Hist1h2aeC0HKE4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Hist1h2aeC0HKE4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hist1h2aeC0HKE4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hist1h2aeC0HKE4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Hist1h2aeC0HKE4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Hist1h2aeC0HKE4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hist1h2aeC0HKE4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hist1h2aeC0HKE4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.59■□□□□ 0.89
Hist1h2aeC0HKE4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hist1h2aeC0HKE4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hist1h2aeC0HKE4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hist1h2aeC0HKE4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hist1h2aeC0HKE4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Hist1h2aeC0HKE4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
Hist1h2aeC0HKE4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hist1h2aeC0HKE4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.57■□□□□ 0.88
Hist1h2aeC0HKE4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hist1h2aeC0HKE4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hist1h2aeC0HKE4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist1h2aeC0HKE4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist1h2aeC0HKE4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.56■□□□□ 0.88
Hist1h2aeC0HKE4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.56■□□□□ 0.88
Hist1h2aeC0HKE4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Hist1h2aeC0HKE4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hist1h2aeC0HKE4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hist1h2aeC0HKE4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hist1h2aeC0HKE4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Hist1h2aeC0HKE4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hist1h2aeC0HKE4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hist1h2aeC0HKE4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.55■□□□□ 0.88
Hist1h2aeC0HKE4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aeC0HKE4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aeC0HKE4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aeC0HKE4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.54■□□□□ 0.88
Hist1h2aeC0HKE4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aeC0HKE4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aeC0HKE4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aeC0HKE4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aeC0HKE4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
Hist1h2aeC0HKE4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hist1h2aeC0HKE4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hist1h2aeC0HKE4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hist1h2aeC0HKE4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hist1h2aeC0HKE4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hist1h2aeC0HKE4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hist1h2aeC0HKE4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.52■□□□□ 0.88
Hist1h2aeC0HKE4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hist1h2aeC0HKE4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hist1h2aeC0HKE4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Hist1h2aeC0HKE4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hist1h2aeC0HKE4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Hist1h2aeC0HKE4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hist1h2aeC0HKE4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hist1h2aeC0HKE4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hist1h2aeC0HKE4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h2aeC0HKE4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h2aeC0HKE4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Hist1h2aeC0HKE4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h2aeC0HKE4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Hist1h2aeC0HKE4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hist1h2aeC0HKE4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h2aeC0HKE4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h2aeC0HKE4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h2aeC0HKE4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h2aeC0HKE4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hist1h2aeC0HKE4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hist1h2aeC0HKE4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hist1h2aeC0HKE4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hist1h2aeC0HKE4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms