Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
Shroom2A2ALU4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC37.79■■■■□ 3.64
Shroom2A2ALU4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
Shroom2A2ALU4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
Shroom2A2ALU4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC37.77■■■■□ 3.64
Shroom2A2ALU4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC37.77■■■■□ 3.64
Shroom2A2ALU4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
Shroom2A2ALU4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
Shroom2A2ALU4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC37.77■■■■□ 3.64
Shroom2A2ALU4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
Shroom2A2ALU4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
Shroom2A2ALU4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC37.74■■■■□ 3.63
Shroom2A2ALU4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC37.72■■■■□ 3.63
Shroom2A2ALU4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC37.72■■■■□ 3.63
Shroom2A2ALU4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC37.72■■■■□ 3.63
Shroom2A2ALU4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC37.72■■■■□ 3.63
Shroom2A2ALU4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
Shroom2A2ALU4 Gm9905-201ENSMUST00000065740 1845 ntBASIC37.71■■■■□ 3.63
Shroom2A2ALU4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC37.7■■■■□ 3.63
Shroom2A2ALU4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC37.69■■■■□ 3.62
Shroom2A2ALU4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC37.69■■■■□ 3.62
Shroom2A2ALU4 Terc-201ENSMUST00000082862 423 ntBASIC37.69■■■■□ 3.62
Shroom2A2ALU4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
Shroom2A2ALU4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC37.67■■■■□ 3.62
Shroom2A2ALU4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC37.67■■■■□ 3.62
Shroom2A2ALU4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC37.65■■■■□ 3.62
Shroom2A2ALU4 Gm21956-201ENSMUST00000179946 522 ntBASIC37.65■■■■□ 3.62
Shroom2A2ALU4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
Shroom2A2ALU4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
Shroom2A2ALU4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC37.63■■■■□ 3.61
Shroom2A2ALU4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
Shroom2A2ALU4 Etf1-202ENSMUST00000180351 108 ntBASIC37.62■■■■□ 3.61
Shroom2A2ALU4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Shroom2A2ALU4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC37.6■■■■□ 3.61
Shroom2A2ALU4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC37.6■■■■□ 3.61
Shroom2A2ALU4 Gm43034-201ENSMUST00000198678 1364 ntBASIC37.6■■■■□ 3.61
Shroom2A2ALU4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Shroom2A2ALU4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.61
Shroom2A2ALU4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC37.57■■■■□ 3.61
Shroom2A2ALU4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Shroom2A2ALU4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
Shroom2A2ALU4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Shroom2A2ALU4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC37.55■■■■□ 3.6
Shroom2A2ALU4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
Shroom2A2ALU4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC37.54■■■■□ 3.6
Shroom2A2ALU4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
Shroom2A2ALU4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Shroom2A2ALU4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
Shroom2A2ALU4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC37.53■■■■□ 3.6
Shroom2A2ALU4 Gm44428-201ENSMUST00000204474 874 ntBASIC37.52■■■■□ 3.6
Shroom2A2ALU4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC37.52■■■■□ 3.6
Shroom2A2ALU4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC37.51■■■■□ 3.59
Shroom2A2ALU4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC37.51■■■■□ 3.59
Shroom2A2ALU4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC37.5■■■■□ 3.59
Shroom2A2ALU4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
Shroom2A2ALU4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
Shroom2A2ALU4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
Shroom2A2ALU4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
Shroom2A2ALU4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC37.48■■■■□ 3.59
Shroom2A2ALU4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC37.47■■■■□ 3.59
Shroom2A2ALU4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
Shroom2A2ALU4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
Shroom2A2ALU4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC37.46■■■■□ 3.59
Shroom2A2ALU4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC37.46■■■■□ 3.59
Shroom2A2ALU4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
Shroom2A2ALU4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC37.45■■■■□ 3.59
Shroom2A2ALU4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
Shroom2A2ALU4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC37.45■■■■□ 3.59
Shroom2A2ALU4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC37.44■■■■□ 3.58
Shroom2A2ALU4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC37.44■■■■□ 3.58
Shroom2A2ALU4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Shroom2A2ALU4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC37.44■■■■□ 3.58
Shroom2A2ALU4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Shroom2A2ALU4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC37.43■■■■□ 3.58
Shroom2A2ALU4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
Shroom2A2ALU4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC37.43■■■■□ 3.58
Shroom2A2ALU4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC37.42■■■■□ 3.58
Shroom2A2ALU4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC37.42■■■■□ 3.58
Shroom2A2ALU4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC37.42■■■■□ 3.58
Shroom2A2ALU4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC37.42■■■■□ 3.58
Shroom2A2ALU4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC37.41■■■■□ 3.58
Shroom2A2ALU4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC37.4■■■■□ 3.58
Shroom2A2ALU4 Gm10232-201ENSMUST00000089221 720 ntBASIC37.4■■■■□ 3.58
Shroom2A2ALU4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC37.4■■■■□ 3.58
Shroom2A2ALU4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC37.39■■■■□ 3.58
Shroom2A2ALU4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC37.39■■■■□ 3.58
Shroom2A2ALU4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC37.39■■■■□ 3.58
Shroom2A2ALU4 Gm5131-201ENSMUST00000212776 1238 ntBASIC37.39■■■■□ 3.58
Shroom2A2ALU4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC37.38■■■■□ 3.57
Shroom2A2ALU4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC37.38■■■■□ 3.57
Shroom2A2ALU4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC37.38■■■■□ 3.57
Shroom2A2ALU4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC37.37■■■■□ 3.57
Shroom2A2ALU4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC37.37■■■■□ 3.57
Shroom2A2ALU4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC37.37■■■■□ 3.57
Shroom2A2ALU4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
Shroom2A2ALU4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
Shroom2A2ALU4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC37.36■■■■□ 3.57
Shroom2A2ALU4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC37.36■■■■□ 3.57
Shroom2A2ALU4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
Shroom2A2ALU4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC37.35■■■■□ 3.57
Retrieved 100 of 76,532 protein–RNA pairs in 271.1 ms