Protein–RNA interactions for Protein: A2AF28

Slc25a53, MCG115034, isoform CRA_c, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc25a53A2AF28 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc25a53A2AF28 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Slc25a53A2AF28 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc25a53A2AF28 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.36■□□□□ 0.85
Slc25a53A2AF28 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.36■□□□□ 0.85
Slc25a53A2AF28 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc25a53A2AF28 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc25a53A2AF28 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Slc25a53A2AF28 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Slc25a53A2AF28 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc25a53A2AF28 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc25a53A2AF28 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.34■□□□□ 0.85
Slc25a53A2AF28 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc25a53A2AF28 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc25a53A2AF28 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc25a53A2AF28 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slc25a53A2AF28 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.33■□□□□ 0.84
Slc25a53A2AF28 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Slc25a53A2AF28 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc25a53A2AF28 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc25a53A2AF28 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc25a53A2AF28 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc25a53A2AF28 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.32■□□□□ 0.84
Slc25a53A2AF28 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.31■□□□□ 0.84
Slc25a53A2AF28 Gm14523-201ENSMUST00000117260 558 ntBASIC20.31■□□□□ 0.84
Slc25a53A2AF28 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.31■□□□□ 0.84
Slc25a53A2AF28 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc25a53A2AF28 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc25a53A2AF28 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc25a53A2AF28 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc25a53A2AF28 Gm7332-201ENSMUST00000118351 454 ntBASIC20.3■□□□□ 0.84
Slc25a53A2AF28 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.3■□□□□ 0.84
Slc25a53A2AF28 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc25a53A2AF28 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc25a53A2AF28 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc25a53A2AF28 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Slc25a53A2AF28 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.29■□□□□ 0.84
Slc25a53A2AF28 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Slc25a53A2AF28 Gm27502-201ENSMUST00000183495 199 ntBASIC20.28■□□□□ 0.84
Slc25a53A2AF28 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc25a53A2AF28 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc25a53A2AF28 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Slc25a53A2AF28 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc25a53A2AF28 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc25a53A2AF28 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Slc25a53A2AF28 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc25a53A2AF28 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc25a53A2AF28 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Slc25a53A2AF28 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc25a53A2AF28 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc25a53A2AF28 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.26■□□□□ 0.83
Slc25a53A2AF28 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc25a53A2AF28 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Slc25a53A2AF28 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc25a53A2AF28 Gm44428-201ENSMUST00000204474 874 ntBASIC20.25■□□□□ 0.83
Slc25a53A2AF28 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.25■□□□□ 0.83
Slc25a53A2AF28 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc25a53A2AF28 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Slc25a53A2AF28 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc25a53A2AF28 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Slc25a53A2AF28 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc25a53A2AF28 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc25a53A2AF28 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc25a53A2AF28 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc25a53A2AF28 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc25a53A2AF28 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc25a53A2AF28 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Slc25a53A2AF28 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc25a53A2AF28 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc25a53A2AF28 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Slc25a53A2AF28 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc25a53A2AF28 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc25a53A2AF28 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc25a53A2AF28 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc25a53A2AF28 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc25a53A2AF28 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Slc25a53A2AF28 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc25a53A2AF28 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Slc25a53A2AF28 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc25a53A2AF28 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc25a53A2AF28 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc25a53A2AF28 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.2■□□□□ 0.82
Slc25a53A2AF28 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc25a53A2AF28 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Slc25a53A2AF28 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc25a53A2AF28 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.18■□□□□ 0.82
Slc25a53A2AF28 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc25a53A2AF28 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc25a53A2AF28 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.17■□□□□ 0.82
Slc25a53A2AF28 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.17■□□□□ 0.82
Slc25a53A2AF28 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc25a53A2AF28 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc25a53A2AF28 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Slc25a53A2AF28 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc25a53A2AF28 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.16■□□□□ 0.82
Slc25a53A2AF28 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc25a53A2AF28 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc25a53A2AF28 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Slc25a53A2AF28 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc25a53A2AF28 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms