Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3880A0A1B0GSB3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3880A0A1B0GSB3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3880A0A1B0GSB3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3880A0A1B0GSB3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3880A0A1B0GSB3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3880A0A1B0GSB3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3880A0A1B0GSB3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Gm3880A0A1B0GSB3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Gm3880A0A1B0GSB3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3880A0A1B0GSB3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Gm3880A0A1B0GSB3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3880A0A1B0GSB3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3880A0A1B0GSB3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3880A0A1B0GSB3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Gm3880A0A1B0GSB3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC11.4□□□□□ -0.58
Gm3880A0A1B0GSB3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Gm3880A0A1B0GSB3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3880A0A1B0GSB3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3880A0A1B0GSB3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC11.4□□□□□ -0.58
Gm3880A0A1B0GSB3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Gm3880A0A1B0GSB3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3880A0A1B0GSB3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3880A0A1B0GSB3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3880A0A1B0GSB3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3880A0A1B0GSB3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Gm3880A0A1B0GSB3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3880A0A1B0GSB3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Gm3880A0A1B0GSB3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Gm3880A0A1B0GSB3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3880A0A1B0GSB3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3880A0A1B0GSB3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3880A0A1B0GSB3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Gm3880A0A1B0GSB3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3880A0A1B0GSB3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3880A0A1B0GSB3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC11.38□□□□□ -0.59
Gm3880A0A1B0GSB3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3880A0A1B0GSB3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3880A0A1B0GSB3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm3880A0A1B0GSB3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm3880A0A1B0GSB3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm3880A0A1B0GSB3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3880A0A1B0GSB3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3880A0A1B0GSB3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3880A0A1B0GSB3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3880A0A1B0GSB3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3880A0A1B0GSB3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3880A0A1B0GSB3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Gm3880A0A1B0GSB3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm3880A0A1B0GSB3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Gm3880A0A1B0GSB3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3880A0A1B0GSB3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3880A0A1B0GSB3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3880A0A1B0GSB3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3880A0A1B0GSB3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3880A0A1B0GSB3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm3880A0A1B0GSB3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3880A0A1B0GSB3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gm3880A0A1B0GSB3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3880A0A1B0GSB3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm3880A0A1B0GSB3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm3880A0A1B0GSB3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms