Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv17A0A140T8P8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv17A0A140T8P8 Gm4799-201ENSMUST00000095396 657 ntBASIC17.28■□□□□ 0.36
Trbv17A0A140T8P8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv17A0A140T8P8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv17A0A140T8P8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv17A0A140T8P8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trbv17A0A140T8P8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv17A0A140T8P8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv17A0A140T8P8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv17A0A140T8P8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv17A0A140T8P8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv17A0A140T8P8 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.25■□□□□ 0.35
Trbv17A0A140T8P8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv17A0A140T8P8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv17A0A140T8P8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv17A0A140T8P8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv17A0A140T8P8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv17A0A140T8P8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv17A0A140T8P8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv17A0A140T8P8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv17A0A140T8P8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.23■□□□□ 0.35
Trbv17A0A140T8P8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.23■□□□□ 0.35
Trbv17A0A140T8P8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv17A0A140T8P8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Trbv17A0A140T8P8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv17A0A140T8P8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.22■□□□□ 0.35
Trbv17A0A140T8P8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv17A0A140T8P8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv17A0A140T8P8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv17A0A140T8P8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv17A0A140T8P8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trbv17A0A140T8P8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.21■□□□□ 0.35
Trbv17A0A140T8P8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv17A0A140T8P8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trbv17A0A140T8P8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trbv17A0A140T8P8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trbv17A0A140T8P8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trbv17A0A140T8P8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv17A0A140T8P8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.2■□□□□ 0.34
Trbv17A0A140T8P8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv17A0A140T8P8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv17A0A140T8P8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv17A0A140T8P8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv17A0A140T8P8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv17A0A140T8P8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.19■□□□□ 0.34
Trbv17A0A140T8P8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv17A0A140T8P8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv17A0A140T8P8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trbv17A0A140T8P8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv17A0A140T8P8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv17A0A140T8P8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv17A0A140T8P8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv17A0A140T8P8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trbv17A0A140T8P8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.18■□□□□ 0.34
Trbv17A0A140T8P8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trbv17A0A140T8P8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv17A0A140T8P8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv17A0A140T8P8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv17A0A140T8P8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv17A0A140T8P8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv17A0A140T8P8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.17■□□□□ 0.34
Trbv17A0A140T8P8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv17A0A140T8P8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv17A0A140T8P8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trbv17A0A140T8P8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv17A0A140T8P8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trbv17A0A140T8P8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv17A0A140T8P8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv17A0A140T8P8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.15■□□□□ 0.34
Trbv17A0A140T8P8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv17A0A140T8P8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv17A0A140T8P8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv17A0A140T8P8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv17A0A140T8P8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv17A0A140T8P8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.14■□□□□ 0.33
Trbv17A0A140T8P8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trbv17A0A140T8P8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trbv17A0A140T8P8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trbv17A0A140T8P8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Trbv17A0A140T8P8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv17A0A140T8P8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trbv17A0A140T8P8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trbv17A0A140T8P8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.13■□□□□ 0.33
Trbv17A0A140T8P8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv17A0A140T8P8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv17A0A140T8P8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trbv17A0A140T8P8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv17A0A140T8P8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv17A0A140T8P8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv17A0A140T8P8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv17A0A140T8P8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv17A0A140T8P8 Mir3960-201ENSMUST00000198213 73 ntBASIC17.12■□□□□ 0.33
Trbv17A0A140T8P8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trbv17A0A140T8P8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv17A0A140T8P8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv17A0A140T8P8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trbv17A0A140T8P8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv17A0A140T8P8 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.11■□□□□ 0.33
Trbv17A0A140T8P8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms