Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cfap99A0A140LIX9 Gm14523-201ENSMUST00000117260 558 ntBASIC27.13■■□□□ 1.93
Cfap99A0A140LIX9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cfap99A0A140LIX9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cfap99A0A140LIX9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC27.13■■□□□ 1.93
Cfap99A0A140LIX9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Cfap99A0A140LIX9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cfap99A0A140LIX9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cfap99A0A140LIX9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cfap99A0A140LIX9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Cfap99A0A140LIX9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cfap99A0A140LIX9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cfap99A0A140LIX9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cfap99A0A140LIX9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cfap99A0A140LIX9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cfap99A0A140LIX9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cfap99A0A140LIX9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cfap99A0A140LIX9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Cfap99A0A140LIX9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cfap99A0A140LIX9 Gm9812-201ENSMUST00000061934 968 ntBASIC27.08■■□□□ 1.93
Cfap99A0A140LIX9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cfap99A0A140LIX9 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.08■■□□□ 1.93
Cfap99A0A140LIX9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cfap99A0A140LIX9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC27.07■■□□□ 1.92
Cfap99A0A140LIX9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cfap99A0A140LIX9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
Cfap99A0A140LIX9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.06■■□□□ 1.92
Cfap99A0A140LIX9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Cfap99A0A140LIX9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Cfap99A0A140LIX9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cfap99A0A140LIX9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.04■■□□□ 1.92
Cfap99A0A140LIX9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cfap99A0A140LIX9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Cfap99A0A140LIX9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Cfap99A0A140LIX9 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.03■■□□□ 1.92
Cfap99A0A140LIX9 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.03■■□□□ 1.92
Cfap99A0A140LIX9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
Cfap99A0A140LIX9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.02■■□□□ 1.92
Cfap99A0A140LIX9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.02■■□□□ 1.92
Cfap99A0A140LIX9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27.02■■□□□ 1.92
Cfap99A0A140LIX9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Cfap99A0A140LIX9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cfap99A0A140LIX9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Cfap99A0A140LIX9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Cfap99A0A140LIX9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
Cfap99A0A140LIX9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27■■□□□ 1.91
Cfap99A0A140LIX9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Cfap99A0A140LIX9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Cfap99A0A140LIX9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.99■■□□□ 1.91
Cfap99A0A140LIX9 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.99■■□□□ 1.91
Cfap99A0A140LIX9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Cfap99A0A140LIX9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Cfap99A0A140LIX9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cfap99A0A140LIX9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
Cfap99A0A140LIX9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cfap99A0A140LIX9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cfap99A0A140LIX9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cfap99A0A140LIX9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cfap99A0A140LIX9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cfap99A0A140LIX9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.97■■□□□ 1.91
Cfap99A0A140LIX9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cfap99A0A140LIX9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cfap99A0A140LIX9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cfap99A0A140LIX9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cfap99A0A140LIX9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cfap99A0A140LIX9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Cfap99A0A140LIX9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Cfap99A0A140LIX9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Cfap99A0A140LIX9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Cfap99A0A140LIX9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cfap99A0A140LIX9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cfap99A0A140LIX9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Cfap99A0A140LIX9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Cfap99A0A140LIX9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.93■■□□□ 1.9
Cfap99A0A140LIX9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Cfap99A0A140LIX9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Cfap99A0A140LIX9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.92■■□□□ 1.9
Cfap99A0A140LIX9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Cfap99A0A140LIX9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.92■■□□□ 1.9
Cfap99A0A140LIX9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Cfap99A0A140LIX9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cfap99A0A140LIX9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Cfap99A0A140LIX9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cfap99A0A140LIX9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cfap99A0A140LIX9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cfap99A0A140LIX9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cfap99A0A140LIX9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cfap99A0A140LIX9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Cfap99A0A140LIX9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
Cfap99A0A140LIX9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cfap99A0A140LIX9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.88■■□□□ 1.89
Cfap99A0A140LIX9 Gm10420-201ENSMUST00000121713 882 ntBASIC26.88■■□□□ 1.89
Cfap99A0A140LIX9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cfap99A0A140LIX9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Cfap99A0A140LIX9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cfap99A0A140LIX9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cfap99A0A140LIX9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cfap99A0A140LIX9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Cfap99A0A140LIX9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cfap99A0A140LIX9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms