Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm28778A0A087WSK7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28778A0A087WSK7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.51■□□□□ 0.55
Gm28778A0A087WSK7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28778A0A087WSK7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28778A0A087WSK7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28778A0A087WSK7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28778A0A087WSK7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28778A0A087WSK7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28778A0A087WSK7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28778A0A087WSK7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.49■□□□□ 0.55
Gm28778A0A087WSK7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28778A0A087WSK7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28778A0A087WSK7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28778A0A087WSK7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28778A0A087WSK7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.49■□□□□ 0.55
Gm28778A0A087WSK7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28778A0A087WSK7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Gm28778A0A087WSK7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28778A0A087WSK7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28778A0A087WSK7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Gm28778A0A087WSK7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28778A0A087WSK7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28778A0A087WSK7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28778A0A087WSK7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.47■□□□□ 0.55
Gm28778A0A087WSK7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28778A0A087WSK7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28778A0A087WSK7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Gm28778A0A087WSK7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28778A0A087WSK7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.46■□□□□ 0.55
Gm28778A0A087WSK7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28778A0A087WSK7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28778A0A087WSK7 Terc-201ENSMUST00000082862 423 ntBASIC18.46■□□□□ 0.55
Gm28778A0A087WSK7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28778A0A087WSK7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Gm28778A0A087WSK7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.45■□□□□ 0.54
Gm28778A0A087WSK7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28778A0A087WSK7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28778A0A087WSK7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28778A0A087WSK7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28778A0A087WSK7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28778A0A087WSK7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28778A0A087WSK7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28778A0A087WSK7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28778A0A087WSK7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm28778A0A087WSK7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm28778A0A087WSK7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm28778A0A087WSK7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm28778A0A087WSK7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.43■□□□□ 0.54
Gm28778A0A087WSK7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm28778A0A087WSK7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Gm28778A0A087WSK7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm28778A0A087WSK7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm28778A0A087WSK7 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.41■□□□□ 0.54
Gm28778A0A087WSK7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm28778A0A087WSK7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm28778A0A087WSK7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Gm28778A0A087WSK7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28778A0A087WSK7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28778A0A087WSK7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28778A0A087WSK7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28778A0A087WSK7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28778A0A087WSK7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28778A0A087WSK7 Scarna2-201ENSMUST00000157560 414 ntBASIC18.39■□□□□ 0.53
Gm28778A0A087WSK7 Gm9806-201ENSMUST00000051080 552 ntBASIC18.39■□□□□ 0.53
Gm28778A0A087WSK7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm28778A0A087WSK7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Gm28778A0A087WSK7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm28778A0A087WSK7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.39■□□□□ 0.53
Gm28778A0A087WSK7 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.38■□□□□ 0.53
Gm28778A0A087WSK7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28778A0A087WSK7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.38■□□□□ 0.53
Gm28778A0A087WSK7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28778A0A087WSK7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28778A0A087WSK7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28778A0A087WSK7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Gm28778A0A087WSK7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm28778A0A087WSK7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm28778A0A087WSK7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28778A0A087WSK7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28778A0A087WSK7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28778A0A087WSK7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28778A0A087WSK7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28778A0A087WSK7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28778A0A087WSK7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm28778A0A087WSK7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28778A0A087WSK7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28778A0A087WSK7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gm28778A0A087WSK7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.35■□□□□ 0.53
Gm28778A0A087WSK7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28778A0A087WSK7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28778A0A087WSK7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28778A0A087WSK7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28778A0A087WSK7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28778A0A087WSK7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Gm28778A0A087WSK7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28778A0A087WSK7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.33■□□□□ 0.52
Gm28778A0A087WSK7 Gm11687-201ENSMUST00000118911 886 ntBASIC18.33■□□□□ 0.52
Gm28778A0A087WSK7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Gm28778A0A087WSK7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms