Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3-4A0A075B654 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3-4A0A075B654 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3-4A0A075B654 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3-4A0A075B654 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.26■□□□□ 0.03
Trav3-4A0A075B654 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3-4A0A075B654 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav3-4A0A075B654 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav3-4A0A075B654 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3-4A0A075B654 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3-4A0A075B654 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3-4A0A075B654 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 AC166822.3-201ENSMUST00000227394 661 ntBASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav3-4A0A075B654 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.23■□□□□ 0.03
Trav3-4A0A075B654 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-4A0A075B654 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-4A0A075B654 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Trav3-4A0A075B654 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trav3-4A0A075B654 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-4A0A075B654 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3-4A0A075B654 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav3-4A0A075B654 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3-4A0A075B654 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3-4A0A075B654 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3-4A0A075B654 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3-4A0A075B654 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav3-4A0A075B654 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3-4A0A075B654 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav3-4A0A075B654 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav3-4A0A075B654 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav3-4A0A075B654 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav3-4A0A075B654 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-4A0A075B654 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-4A0A075B654 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-4A0A075B654 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-4A0A075B654 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-4A0A075B654 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-4A0A075B654 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-4A0A075B654 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3-4A0A075B654 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3-4A0A075B654 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav3-4A0A075B654 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3-4A0A075B654 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3-4A0A075B654 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trav3-4A0A075B654 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3-4A0A075B654 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3-4A0A075B654 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-4A0A075B654 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-4A0A075B654 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-4A0A075B654 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav3-4A0A075B654 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav3-4A0A075B654 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-4A0A075B654 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav3-4A0A075B654 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-4A0A075B654 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav3-4A0A075B654 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3-4A0A075B654 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-4A0A075B654 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-4A0A075B654 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-4A0A075B654 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-4A0A075B654 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav3-4A0A075B654 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-4A0A075B654 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-4A0A075B654 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-4A0A075B654 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-4A0A075B654 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-4A0A075B654 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3-4A0A075B654 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav3-4A0A075B654 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-4A0A075B654 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-4A0A075B654 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-4A0A075B654 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav3-4A0A075B654 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-4A0A075B654 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3-4A0A075B654 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav3-4A0A075B654 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-4A0A075B654 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-4A0A075B654 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.15■□□□□ 0.02
Trav3-4A0A075B654 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-4A0A075B654 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-4A0A075B654 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-4A0A075B654 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav3-4A0A075B654 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3-4A0A075B654 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav3-4A0A075B654 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav3-4A0A075B654 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3-4A0A075B654 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3-4A0A075B654 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Trav3-4A0A075B654 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms