Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NclP09405 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC23.11■■□□□ 1.29
NclP09405 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC23.11■■□□□ 1.29
NclP09405 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
NclP09405 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC23.11■■□□□ 1.29
NclP09405 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC23.11■■□□□ 1.29
NclP09405 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
NclP09405 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC23.11■■□□□ 1.29
NclP09405 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NclP09405 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NclP09405 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
NclP09405 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NclP09405 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC23.1■■□□□ 1.29
NclP09405 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC23.1■■□□□ 1.29
NclP09405 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NclP09405 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC23.1■■□□□ 1.29
NclP09405 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NclP09405 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC23.1■■□□□ 1.29
NclP09405 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
NclP09405 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC23.1■■□□□ 1.29
NclP09405 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NclP09405 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
NclP09405 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NclP09405 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NclP09405 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NclP09405 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Gm4995-201ENSMUST00000117247 432 ntBASIC23.09■■□□□ 1.29
NclP09405 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC23.09■■□□□ 1.29
NclP09405 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC23.09■■□□□ 1.29
NclP09405 Gm24513-201ENSMUST00000174964 138 ntBASIC23.09■■□□□ 1.29
NclP09405 AC225888.1-201ENSMUST00000227184 728 ntBASIC23.09■■□□□ 1.29
NclP09405 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Gm10175-201ENSMUST00000086013 645 ntBASIC23.09■■□□□ 1.29
NclP09405 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NclP09405 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC23.08■■□□□ 1.29
NclP09405 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NclP09405 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NclP09405 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NclP09405 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NclP09405 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
NclP09405 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
NclP09405 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
NclP09405 Gm27397-201ENSMUST00000184997 107 ntBASIC23.08■■□□□ 1.29
NclP09405 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
NclP09405 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NclP09405 Best4-ps-201ENSMUST00000129783 1380 ntBASIC23.08■■□□□ 1.29
NclP09405 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
NclP09405 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NclP09405 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NclP09405 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
NclP09405 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NclP09405 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NclP09405 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
NclP09405 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
NclP09405 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NclP09405 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NclP09405 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NclP09405 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NclP09405 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC23.07■■□□□ 1.28
NclP09405 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC23.07■■□□□ 1.28
NclP09405 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NclP09405 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NclP09405 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NclP09405 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NclP09405 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
NclP09405 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms