Protein–RNA interactions for Protein: A0A087WSH0

1700031M16Rik, RIKEN cDNA 1700031M16 gene, mousemouse

Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700031M16RikA0A087WSH0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm7230-201ENSMUST00000173026 815 ntBASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
1700031M16RikA0A087WSH0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm2651-201ENSMUST00000203560 838 ntBASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
1700031M16RikA0A087WSH0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm8344-201ENSMUST00000119813 856 ntBASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 App-207ENSMUST00000227737 2827 ntBASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
1700031M16RikA0A087WSH0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm44771-201ENSMUST00000206975 626 ntBASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
1700031M16RikA0A087WSH0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
1700031M16RikA0A087WSH0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
1700031M16RikA0A087WSH0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
1700031M16RikA0A087WSH0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms