Protein–RNA interactions for Protein: Q6NV83

U2surp, U2 snRNP-associated SURP motif-containing protein, mousemouse

Known RBP Predictions only

Length 1,029 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2surpQ6NV83 Gm10060-201ENSMUST00000212002 111 ntBASIC20.35■□□□□ 0.85
U2surpQ6NV83 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2surpQ6NV83 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2surpQ6NV83 Grk6-207ENSMUST00000225925 2769 ntBASIC20.35■□□□□ 0.85
U2surpQ6NV83 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2surpQ6NV83 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2surpQ6NV83 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2surpQ6NV83 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.35■□□□□ 0.85
U2surpQ6NV83 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.35■□□□□ 0.85
U2surpQ6NV83 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
U2surpQ6NV83 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.35■□□□□ 0.85
U2surpQ6NV83 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2surpQ6NV83 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2surpQ6NV83 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2surpQ6NV83 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
U2surpQ6NV83 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.34■□□□□ 0.85
U2surpQ6NV83 Gm18733-201ENSMUST00000173950 856 ntBASIC20.34■□□□□ 0.85
U2surpQ6NV83 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
U2surpQ6NV83 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2surpQ6NV83 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2surpQ6NV83 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.33■□□□□ 0.85
U2surpQ6NV83 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
U2surpQ6NV83 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
U2surpQ6NV83 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Gm2651-201ENSMUST00000203560 838 ntBASIC20.33■□□□□ 0.85
U2surpQ6NV83 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2surpQ6NV83 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
U2surpQ6NV83 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
U2surpQ6NV83 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
U2surpQ6NV83 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.33■□□□□ 0.84
U2surpQ6NV83 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
U2surpQ6NV83 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
U2surpQ6NV83 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.32■□□□□ 0.84
U2surpQ6NV83 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.32■□□□□ 0.84
U2surpQ6NV83 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.32■□□□□ 0.84
U2surpQ6NV83 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2surpQ6NV83 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2surpQ6NV83 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.31■□□□□ 0.84
U2surpQ6NV83 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
U2surpQ6NV83 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.31■□□□□ 0.84
U2surpQ6NV83 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.31■□□□□ 0.84
U2surpQ6NV83 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
U2surpQ6NV83 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms